Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_2832: 11200 - KOG1611 Predicted short chain-type dehydrogenase, at 319587 to 320810 11200 mRNA_2833: 11201 - KOG0254 Predicted transporter (major facilitator superfamily), at 321440 to 324159 11201 mRNA_2834: 11202 - K01001 ALG7 UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase, at 324460 to 326344 11202 mRNA_2835: 11203 - K00022 HADH 3-hydroxyacyl-CoA dehydrogenase, at 326503 to 328205 11203 mRNA_2836: 11204 - HMMPfam-Putative zinc finger motif, C2HC5-type-PF06221, at 328530 to 330386 11204
Group Condition mRNA_2832 mRNA_2833 mRNA_2834 mRNA_2835 mRNA_2836
11200
11201
11202
11203
11204
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 0.0   -1.9 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 -0.2   -0.8 -0.2
growth on oleic acid YNB Oleic Acid 0.1 0.0   -1.3 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.0   -0.6 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 0.3   -0.6 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid 0.5 -0.3   -1.3 0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 0.0   -0.6 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.2   -0.3 0.2
ypd buoyancy 40 hrs Median Buoyancy 0.0 -0.2   0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.2 0.1   -0.4 0.1
growth on oleic acid YNB Glucose 0.3 0.1   -0.3 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.4 0.2   -0.5 -0.1
auxotrophy YNB Glucose 75mM Arginine 0.7 -0.4   -0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy 0.3 -0.1   -0.0 -0.0
auxotrophy YNB Glucose 75mM Methionine 0.5 -0.3   0.1 0.1
auxotrophy Dropout Complete 0.6 -0.3   -0.1 0.2
auxotrophy YNB Glucose 0.5 -0.4   0.2 0.0
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 0.2   -0.0 0.3
growth on ricinoleic acid YNB Glucose 0.5 -0.1   -0.1 0.3
growth on ypd YPD -0.0 0.2   0.2 0.4
facs on lipid accumulation Sorted High BODIPY Gate 0.2 0.6   -0.4 0.4
remove
mRNA_2832
plot
remove
mRNA_2833
plot
remove
mRNA_2834
remove
mRNA_2835
plot
remove
mRNA_2836
plot