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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_2832: 11200 - KOG1611 Predicted short chain-type dehydrogenase, at 319587 to 320810
11200
mRNA_2833: 11201 - KOG0254 Predicted transporter (major facilitator superfamily), at 321440 to 324159
11201
mRNA_2834: 11202 - K01001 ALG7 UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase, at 324460 to 326344
11202
mRNA_2835: 11203 - K00022 HADH 3-hydroxyacyl-CoA dehydrogenase, at 326503 to 328205
11203
mRNA_2836: 11204 - HMMPfam-Putative zinc finger motif, C2HC5-type-PF06221, at 328530 to 330386
11204
Group
Condition
mRNA_2832
mRNA_2833
mRNA_2834
mRNA_2835
mRNA_2836
11200
11201
11202
11203
11204
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
0.0
-1.9
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
-0.2
-0.8
-0.2
growth on oleic acid
YNB Oleic Acid
0.1
0.0
-1.3
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.0
-0.6
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
0.3
-0.6
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.5
-0.3
-1.3
0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
0.0
-0.6
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.2
-0.3
0.2
ypd buoyancy
40 hrs Median Buoyancy
0.0
-0.2
0.1
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
0.1
-0.4
0.1
growth on oleic acid
YNB Glucose
0.3
0.1
-0.3
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
0.4
0.2
-0.5
-0.1
auxotrophy
YNB Glucose 75mM Arginine
0.7
-0.4
-0.1
-0.1
ypd buoyancy
40 hrs High Buoyancy
0.3
-0.1
-0.0
-0.0
auxotrophy
YNB Glucose 75mM Methionine
0.5
-0.3
0.1
0.1
auxotrophy
Dropout Complete
0.6
-0.3
-0.1
0.2
auxotrophy
YNB Glucose
0.5
-0.4
0.2
0.0
ypd buoyancy
40 hrs No Buoyancy Separation
0.1
0.2
-0.0
0.3
growth on ricinoleic acid
YNB Glucose
0.5
-0.1
-0.1
0.3
growth on ypd
YPD
-0.0
0.2
0.2
0.4
facs on lipid accumulation
Sorted High BODIPY Gate
0.2
0.6
-0.4
0.4
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