Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2830: 11198 - BLAST 60S ribosomal protein L33-A [Wallemia ichthyophag..., at 315328 to 317739 11198 mRNA_2831: 11199 - HMMPfam-short chain dehydrogenase-PF00106,PRINTS-Glucose/ribitol dehydrogenase family signature-PR00081,SMART--SM00822,SUPERFAMILY--SSF51735, at 318054 to 319183 11199 mRNA_2832: 11200 - KOG1611 Predicted short chain-type dehydrogenase, at 319587 to 320810 11200 mRNA_2833: 11201 - KOG0254 Predicted transporter (major facilitator superfamily), at 321440 to 324159 11201 mRNA_2834: 11202 - K01001 ALG7 UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase, at 324460 to 326344 11202
Group Condition mRNA_2830 mRNA_2831 mRNA_2832 mRNA_2833 mRNA_2834
11198
11199
11200
11201
11202
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.9 0.1 0.2  
ypd buoyancy 40 hrs Low Buoyancy 0.0 0.1 -0.1 -0.2  
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.2 0.0 -0.2  
ypd buoyancy 40 hrs High Buoyancy -0.2 0.0 0.3 -0.1  
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 0.3 -0.3 0.3  
growth on ricinoleic acid YNB Ricinoleic Acid 0.3 -0.0 -0.1 0.0  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 0.6 -0.3 -0.2  
facs on lipid accumulation Sorted No BODIPY Gate 0.4 -0.4 0.2 0.1  
facs on lipid accumulation Sorted Low BODIPY Gate 0.0 -0.4 0.4 0.2  
growth on oleic acid YNB Oleic Acid 0.1 0.1 0.1 0.0  
growth on oleic acid YNB Glucose -0.1 0.1 0.3 0.1  
growth on ypd YPD 0.0 0.1 -0.0 0.2  
auxotrophy YNB Glucose 75mM Methionine 0.1 0.3 0.5 -0.3  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 0.7 -0.1 -0.0  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.3 0.2 0.5 -0.3  
auxotrophy YNB Glucose 0.1 0.4 0.5 -0.4  
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 0.8 -0.2 0.0  
growth on ricinoleic acid YNB Glucose 0.4 0.0 0.5 -0.1  
facs on lipid accumulation Sorted High BODIPY Gate 0.2 -0.3 0.2 0.6  
auxotrophy YNB Glucose 75mM Arginine 0.0 0.6 0.7 -0.4  
auxotrophy Dropout Complete 0.2 0.9 0.6 -0.3  
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