Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_2829: 11197 - Hypothetical Protein, at 313817 to 315093 11197 mRNA_2830: 11198 - BLAST 60S ribosomal protein L33-A [Wallemia ichthyophag..., at 315328 to 317739 11198 mRNA_2831: 11199 - HMMPfam-short chain dehydrogenase-PF00106,PRINTS-Glucose/ribitol dehydrogenase family signature-PR00081,SMART--SM00822,SUPERFAMILY--SSF51735, at 318054 to 319183 11199 mRNA_2832: 11200 - KOG1611 Predicted short chain-type dehydrogenase, at 319587 to 320810 11200 mRNA_2833: 11201 - KOG0254 Predicted transporter (major facilitator superfamily), at 321440 to 324159 11201
Group Condition mRNA_2829 mRNA_2830 mRNA_2831 mRNA_2832 mRNA_2833
11197
11198
11199
11200
11201
ypd buoyancy 40 hrs No Buoyancy Separation -1.0 -0.1 -0.9 0.1 0.2
ypd buoyancy 40 hrs High Buoyancy -0.5 -0.2 0.0 0.3 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.1 0.2 0.0 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.1 0.0 0.1 -0.1 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 0.3 -0.0 -0.1 0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.2 0.4 -0.4 0.2 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 0.0 0.6 -0.3 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 -0.3 0.3 -0.3 0.3
growth on oleic acid YNB Oleic Acid -0.1 0.1 0.1 0.1 0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.0 0.7 -0.1 -0.0
growth on oleic acid YNB Glucose 0.0 -0.1 0.1 0.3 0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.3 0.2 -0.3 0.2 0.6
facs on lipid accumulation Sorted Low BODIPY Gate 0.3 0.0 -0.4 0.4 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.0 0.8 -0.2 0.0
auxotrophy YNB Glucose 75mM Methionine 0.2 0.1 0.3 0.5 -0.3
auxotrophy YNB Glucose 0.1 0.1 0.4 0.5 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 0.3 0.2 0.5 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.1 0.0 0.6 0.7 -0.4
growth on ypd YPD 0.5 0.0 0.1 -0.0 0.2
growth on ricinoleic acid YNB Glucose 0.3 0.4 0.0 0.5 -0.1
auxotrophy Dropout Complete 0.4 0.2 0.9 0.6 -0.3
remove
mRNA_2829
plot
remove
mRNA_2830
plot
remove
mRNA_2831
remove
mRNA_2832
plot
remove
mRNA_2833
plot