Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2820: 11188 - HMMPfam-2-oxoacid dehydrogenases acyltransferase (catalytic domain)-PF00198,HMMPfam-Biotin-requiring enzyme-PF00364,HMMPfam-e3 binding domain-PF02817,SUPERFAMILY--SSF47005,SUPERFAMILY--SSF51230,SUPERFAMILY--SSF52777, at 297960 to 299453 11188 mRNA_2821: 11189 - BLAST DNA polymerase gamma [Kalmanozyma brasiliensis GH..., at 300473 to 301385 11189 mRNA_2822: 11190 - SUPERFAMILY--SSF52047, at 301729 to 303000 11190 mRNA_2823: 11191 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047, at 303480 to 304770 11191 mRNA_2824: 11192 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 304875 to 305755 11192
Group Condition mRNA_2820 mRNA_2821 mRNA_2822 mRNA_2823 mRNA_2824
11188
11189
11190
11191
11192
growth on ricinoleic acid YNB Methylricinoleic Acid -1.4   -0.4 -0.0 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation -1.3   0.3 0.1 -1.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.9   -0.6 -0.0 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.2   -1.3 0.2 -0.9
growth on ricinoleic acid YNB Glucose -1.5   0.1 -0.0 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.6   0.0 -0.2 -0.7
auxotrophy YNB Glucose -2.8   1.4 0.1 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.7   -0.8 -0.1 0.3
growth on oleic acid YNB Glucose -0.1   -0.8 0.1 -0.3
auxotrophy Dropout Complete -2.3   1.4 0.2 -0.3
auxotrophy YNB Glucose 75mM Methionine -2.2   1.1 0.1 0.1
ypd buoyancy 40 hrs Median Buoyancy -1.1   1.0 -0.1 -0.3
ypd buoyancy 40 hrs High Buoyancy -1.2   1.5 -0.1 -0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2   -0.2 -0.0 -0.1
ypd buoyancy 40 hrs Low Buoyancy -1.0   0.9 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.7   -0.4 -0.1 -0.0
growth on ypd YPD -0.9   1.9 0.0 -0.2
auxotrophy YNB Glucose 75mM Arginine -1.5   2.3 0.1 0.0
growth on oleic acid YNB Oleic Acid -0.0   1.3 0.1 -0.4
facs on lipid accumulation Sorted High BODIPY Gate 1.0   -0.3 0.3 0.6
facs on lipid accumulation Sorted No BODIPY Gate 1.8   0.2 0.2 0.1
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