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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_2817: 11185 - KOG2946 Uncharacterized conserved protein, at 290103 to 291394
11185
mRNA_2818: 11186 - K02178 BUB1 checkpoint serine/threonine-protein kinase, at 292080 to 296876
11186
mRNA_2819: 11187 - HMMPfam-linker histone H1 and H5 family-PF00538,ProSiteProfiles-Linker histone H1/H5 globular (H15) domain profile.-PS51504,SUPERFAMILY--SSF46785, at 297100 to 297771
11187
mRNA_2820: 11188 - HMMPfam-2-oxoacid dehydrogenases acyltransferase (catalytic domain)-PF00198,HMMPfam-Biotin-requiring enzyme-PF00364,HMMPfam-e3 binding domain-PF02817,SUPERFAMILY--SSF47005,SUPERFAMILY--SSF51230,SUPERFAMILY--SSF52777, at 297960 to 299453
11188
mRNA_2821: 11189 - BLAST DNA polymerase gamma [Kalmanozyma brasiliensis GH..., at 300473 to 301385
11189
Group
Condition
mRNA_2817
mRNA_2818
mRNA_2819
mRNA_2820
mRNA_2821
11185
11186
11187
11188
11189
auxotrophy
Dropout Complete
-0.4
-0.3
-0.1
-2.3
auxotrophy
YNB Glucose
0.0
-0.3
0.2
-2.8
auxotrophy
YNB Glucose 75mM Methionine
0.2
-0.6
0.4
-2.2
ypd buoyancy
40 hrs No Buoyancy Separation
-1.9
0.7
0.8
-1.3
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.0
-0.1
-1.5
ypd buoyancy
40 hrs High Buoyancy
-0.6
0.2
0.1
-1.2
growth on ricinoleic acid
YNB Glucose
-0.1
-0.2
0.5
-1.5
growth on ypd
YPD
-0.1
-0.3
0.3
-0.9
ypd buoyancy
40 hrs Median Buoyancy
0.3
-0.2
0.2
-1.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
-1.4
-0.0
1.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.4
-0.4
0.1
-0.6
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
-1.2
0.4
0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
0.3
0.8
-1.4
ypd buoyancy
40 hrs Low Buoyancy
0.5
-0.1
0.1
-1.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.4
-0.0
-0.1
-0.7
growth on ricinoleic acid
YNB Ricinoleic Acid
0.2
-0.4
0.7
-0.9
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-1.5
-0.1
1.8
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.2
0.2
0.2
-0.2
growth on oleic acid
YNB Glucose
0.6
-0.4
0.4
-0.1
growth on oleic acid
YNB Oleic Acid
0.7
0.1
0.2
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
0.4
0.5
0.7
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