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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_2815: 11183 - K09699 DBT, bkdB 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase), at 286881 to 288952
11183
mRNA_2816: 11184 - HMMPfam-linker histone H1 and H5 family-PF00538,ProSiteProfiles-Linker histone H1/H5 globular (H15) domain profile.-PS51504,SMART-Domain in histone families 1 and 5-SM00526,SUPERFAMILY--SSF46785, at 289258 to 289809
11184
mRNA_2817: 11185 - KOG2946 Uncharacterized conserved protein, at 290103 to 291394
11185
mRNA_2818: 11186 - K02178 BUB1 checkpoint serine/threonine-protein kinase, at 292080 to 296876
11186
mRNA_2819: 11187 - HMMPfam-linker histone H1 and H5 family-PF00538,ProSiteProfiles-Linker histone H1/H5 globular (H15) domain profile.-PS51504,SUPERFAMILY--SSF46785, at 297100 to 297771
11187
Group
Condition
mRNA_2815
mRNA_2816
mRNA_2817
mRNA_2818
mRNA_2819
11183
11184
11185
11186
11187
ypd buoyancy
40 hrs No Buoyancy Separation
-3.6
1.0
-1.9
0.7
0.8
growth on ricinoleic acid
YNB Ricinoleic Acid
-2.3
0.5
0.2
-0.4
0.7
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
0.4
-0.1
-1.5
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.6
0.3
-0.3
-1.4
-0.0
auxotrophy
Dropout Complete
-0.0
-0.1
-0.4
-0.3
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.3
-0.2
-0.1
-0.0
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-1.8
0.4
-0.2
0.3
0.8
growth on oleic acid
YNB Oleic Acid
-1.3
-0.1
0.7
0.1
0.2
auxotrophy
YNB Glucose
-0.6
0.3
0.0
-0.3
0.2
ypd buoyancy
40 hrs High Buoyancy
0.1
-0.1
-0.6
0.2
0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.6
-0.1
-0.0
-1.2
0.4
growth on ypd
YPD
-0.4
0.3
-0.1
-0.3
0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.2
0.1
0.2
-0.6
0.4
ypd buoyancy
40 hrs Median Buoyancy
-0.4
0.2
0.3
-0.2
0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.5
0.1
0.5
-0.1
0.1
growth on ricinoleic acid
YNB Glucose
-0.5
0.6
-0.1
-0.2
0.5
growth on oleic acid
YNB Glucose
-0.1
0.1
0.6
-0.4
0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.5
0.4
0.4
-0.0
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
0.5
-0.1
0.4
0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.8
0.6
0.4
-0.4
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.8
0.3
0.2
0.2
0.2
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