Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2815: 11183 - K09699 DBT, bkdB 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase), at 286881 to 288952 11183 mRNA_2816: 11184 - HMMPfam-linker histone H1 and H5 family-PF00538,ProSiteProfiles-Linker histone H1/H5 globular (H15) domain profile.-PS51504,SMART-Domain in histone families 1 and 5-SM00526,SUPERFAMILY--SSF46785, at 289258 to 289809 11184 mRNA_2817: 11185 - KOG2946 Uncharacterized conserved protein, at 290103 to 291394 11185 mRNA_2818: 11186 - K02178 BUB1 checkpoint serine/threonine-protein kinase, at 292080 to 296876 11186 mRNA_2819: 11187 - HMMPfam-linker histone H1 and H5 family-PF00538,ProSiteProfiles-Linker histone H1/H5 globular (H15) domain profile.-PS51504,SUPERFAMILY--SSF46785, at 297100 to 297771 11187
Group Condition mRNA_2815 mRNA_2816 mRNA_2817 mRNA_2818 mRNA_2819
11183
11184
11185
11186
11187
ypd buoyancy 40 hrs No Buoyancy Separation -3.6 1.0 -1.9 0.7 0.8
growth on ricinoleic acid YNB Ricinoleic Acid -2.3 0.5 0.2 -0.4 0.7
facs on lipid accumulation Sorted No BODIPY Gate 0.2 0.4 -0.1 -1.5 -0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.6 0.3 -0.3 -1.4 -0.0
auxotrophy Dropout Complete -0.0 -0.1 -0.4 -0.3 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.2 -0.1 -0.0 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -1.8 0.4 -0.2 0.3 0.8
growth on oleic acid YNB Oleic Acid -1.3 -0.1 0.7 0.1 0.2
auxotrophy YNB Glucose -0.6 0.3 0.0 -0.3 0.2
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.1 -0.6 0.2 0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.6 -0.1 -0.0 -1.2 0.4
growth on ypd YPD -0.4 0.3 -0.1 -0.3 0.3
auxotrophy YNB Glucose 75mM Methionine -0.2 0.1 0.2 -0.6 0.4
ypd buoyancy 40 hrs Median Buoyancy -0.4 0.2 0.3 -0.2 0.2
ypd buoyancy 40 hrs Low Buoyancy -0.5 0.1 0.5 -0.1 0.1
growth on ricinoleic acid YNB Glucose -0.5 0.6 -0.1 -0.2 0.5
growth on oleic acid YNB Glucose -0.1 0.1 0.6 -0.4 0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.5 0.4 0.4 -0.0 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 0.5 -0.1 0.4 0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.8 0.6 0.4 -0.4 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.8 0.3 0.2 0.2 0.2
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