Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_2809: 11177 - K08596 SENP7 sentrin-specific protease 7, at 271552 to 278521 11177 mRNA_2810: 11178 - K00026 MDH2 malate dehydrogenase, at 278707 to 280370 11178 mRNA_2811: 11179 - Hypothetical Protein, at 280492 to 281442 11179 mRNA_2812: 11180 - Hypothetical Protein, at 282125 to 283432 11180 mRNA_2813: 11181 - SUPERFAMILY--SSF52047, at 283912 to 285183 11181
Group Condition mRNA_2809 mRNA_2810 mRNA_2811 mRNA_2812 mRNA_2813
11177
11178
11179
11180
11181
growth on ricinoleic acid YNB Ricinoleic Acid 0.3   -1.2 -0.3  
ypd buoyancy 40 hrs No Buoyancy Separation -0.1   -0.8 0.2  
ypd buoyancy 40 hrs Low Buoyancy -0.1   -0.6 -0.1  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.5   -1.3 0.1  
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2   -0.4 -0.0  
auxotrophy YNB Glucose 75mM Methionine -0.3   -0.3 0.1  
facs on lipid accumulation Sorted No BODIPY Gate 0.3   -0.5 -0.1  
ypd buoyancy 40 hrs High Buoyancy -0.1   -0.1 0.0  
ypd buoyancy 40 hrs Median Buoyancy 0.0   -0.2 -0.1  
auxotrophy YNB Glucose 75mM Arginine -0.2   -0.1 0.2  
facs on lipid accumulation Sorted High BODIPY Gate -0.4   0.0 0.3  
facs on lipid accumulation Sorted Low BODIPY Gate 0.2   -0.2 -0.1  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3   -0.4 0.1  
growth on ricinoleic acid YNB Glucose 0.1   0.2 0.0  
auxotrophy YNB Glucose -0.3   0.3 0.4  
growth on ypd YPD 0.4   -0.0 0.1  
growth on oleic acid YNB Oleic Acid 0.2   0.2 0.1  
auxotrophy Dropout Complete -0.2   0.6 0.2  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.6   0.1 -0.1  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.7   0.0 -0.0  
growth on oleic acid YNB Glucose 0.4   0.2 0.3  
remove
mRNA_2809
plot		 remove
mRNA_2810
plot		 remove
mRNA_2811		 remove
mRNA_2812
plot		 remove
mRNA_2813
plot