Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2793: 11161 - KOG3834 Golgi reassembly stacking protein GRASP65, contains PDZ domain, at 228041 to 229604 11161 mRNA_2794: 11162 - BLAST protein FAM72A [Rattus norvegicus], at 230035 to 232978 11162 mRNA_2795: 11163 - SUPERFAMILY--SSF56112, at 233342 to 236388 11163 mRNA_2796: 11164 - K08286 E2.7.11.- protein-serine/threonine kinase, at 236700 to 240335 11164 mRNA_2797: 11165 - HMMPfam-CBP4-PF07960, at 240577 to 240997 11165
Group Condition mRNA_2793 mRNA_2794 mRNA_2795 mRNA_2796 mRNA_2797
11161
11162
11163
11164
11165
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 0.1 0.2 -1.5 -2.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 0.1 -0.2 -1.3 -0.5
facs on lipid accumulation Sorted No BODIPY Gate 0.4 0.3 0.1 -0.9 -1.1
ypd buoyancy 40 hrs High Buoyancy -0.0 0.0 -0.1 -0.7 -0.3
auxotrophy YNB Glucose 75mM Arginine 0.3 0.1 -0.6 -0.1 -0.6
facs on lipid accumulation Sorted Low BODIPY Gate 0.6 0.1 -0.0 -2.1 0.7
ypd buoyancy 40 hrs Low Buoyancy 0.1 0.1 -0.4 -0.1 -0.4
facs on lipid accumulation Sorted High BODIPY Gate 0.7 0.1 -0.2 0.5 -1.8
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3 0.1 -0.2 0.2 -0.8
auxotrophy YNB Glucose 75mM Methionine 0.2 0.0 -0.7 -0.2 0.3
ypd buoyancy 40 hrs Median Buoyancy -0.2 0.2 0.0 0.2 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 -0.2 0.3 0.9 -0.9
auxotrophy YNB Glucose 0.3 0.3 -0.7 0.4 -0.1
auxotrophy Dropout Complete 0.3 0.1 -0.5 0.1 0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3 -0.1 0.2 0.7 -0.2
growth on ypd YPD 0.0 0.1 0.0 0.5 0.4
growth on oleic acid YNB Glucose 0.4 -0.0 -0.1 1.5 -0.1
growth on oleic acid YNB Oleic Acid 0.2 0.1 -0.0 2.7 -0.6
growth on ricinoleic acid YNB Ricinoleic Acid 0.5 0.3 -0.2 3.5 -1.8
growth on ricinoleic acid YNB Glucose 0.7 0.1 -0.5 2.8 -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid 0.4 0.2 -0.6 4.1 -0.9
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