Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2790: 11158 - Hypothetical Protein, at 219629 to 222406 11158 mRNA_2791: 11159 - K05544 DUS3 tRNA-dihydrouridine synthase 3, at 222568 to 225746 11159 mRNA_2792: 11160 - KOG1502 Flavonol reductase/cinnamoyl-CoA reductase, at 226043 to 228012 11160 mRNA_2793: 11161 - KOG3834 Golgi reassembly stacking protein GRASP65, contains PDZ domain, at 228041 to 229604 11161 mRNA_2794: 11162 - BLAST protein FAM72A [Rattus norvegicus], at 230035 to 232978 11162
Group Condition mRNA_2790 mRNA_2791 mRNA_2792 mRNA_2793 mRNA_2794
11158
11159
11160
11161
11162
growth on oleic acid YNB Oleic Acid -0.3 -0.4 0.0 0.2 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.1 0.2 0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.4 0.0 0.2 0.0
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 -0.1 0.0 -0.3 0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.0 0.1 -0.2 0.2
auxotrophy YNB Glucose -0.1 -0.4 -0.1 0.3 0.3
auxotrophy Dropout Complete -0.0 -0.3 -0.1 0.3 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 0.0 0.1 0.3 -0.1
growth on oleic acid YNB Glucose -0.1 -0.2 0.0 0.4 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.0 0.2 0.3 0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.2 0.0 0.3 0.1
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.1 0.1 0.1 0.1
ypd buoyancy 40 hrs High Buoyancy 0.2 0.0 -0.0 -0.0 0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.1 0.1 0.6 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0 -0.3 0.1 0.4 0.2
growth on ypd YPD -0.3 0.5 0.2 0.0 0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.1 -0.1 -0.2 0.4 0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 0.2 0.3 0.1 0.1
growth on ricinoleic acid YNB Glucose -0.0 -0.1 0.1 0.7 0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.1 -0.1 -0.0 0.7 0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 -0.2 0.0 0.5 0.3
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