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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_2783: 11151 - BLAST NADH dehydrogenase (ubiquinone) Fe-S protein 5 [C..., at 202335 to 202970
11151
mRNA_2784: 11152 - K20241 WDR44, RAB11BP WD repeat-containing protein 44, at 204617 to 208124
11152
mRNA_2785: 11153 - ProSiteProfiles-CRIB domain profile.-PS50108, at 208531 to 209463
11153
mRNA_2786: 11154 - Hypothetical Protein, at 209744 to 210942
11154
mRNA_2787: 11155 - KOG1848 Uncharacterized conserved protein, at 211081 to 216177
11155
Group
Condition
mRNA_2783
mRNA_2784
mRNA_2785
mRNA_2786
mRNA_2787
11151
11152
11153
11154
11155
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.9
-0.0
-0.2
0.7
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.3
0.4
0.0
facs on lipid accumulation
Sorted High BODIPY Gate
0.5
-0.5
0.0
0.2
growth on ypd
YPD
0.6
0.0
-0.3
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.0
0.1
0.2
0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
0.1
0.6
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
-0.1
0.6
0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.1
0.4
0.3
facs on lipid accumulation
Sorted No BODIPY Gate
0.5
-0.0
-0.2
0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
0.0
0.8
0.1
auxotrophy
Dropout Complete
0.7
-0.2
-0.1
0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.0
0.2
0.6
0.2
auxotrophy
YNB Glucose 75mM Arginine
0.9
0.2
-0.3
0.4
auxotrophy
YNB Glucose
0.9
0.2
-0.3
0.4
growth on oleic acid
YNB Glucose
0.9
0.0
-0.2
0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
0.5
0.2
0.4
0.1
auxotrophy
YNB Glucose 75mM Methionine
1.0
0.1
-0.1
0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.3
0.5
0.5
0.3
growth on oleic acid
YNB Oleic Acid
0.8
0.3
-0.1
0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.9
0.3
0.1
0.7
growth on ricinoleic acid
YNB Glucose
1.1
0.4
-0.0
0.6
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