Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2768: 11136 - K08681 pdxT, pdx2 5'-phosphate synthase pdxT subunit, at 170479 to 171341 11136 mRNA_2769: 11137 - K06215 pdxS, pdx1 pyridoxal 5'-phosphate synthase pdxS subunit, at 171565 to 173167 11137 mRNA_2770: 11138 - KOG0400 40S ribosomal protein S13, at 173510 to 175017 11138 mRNA_2771: 11139 - KOG4072 Signal peptidase complex, subunit SPC25, at 175827 to 177001 11139 mRNA_2772: 11140 - SUPERFAMILY--SSF56112, at 177192 to 178295 11140
Group Condition mRNA_2768 mRNA_2769 mRNA_2770 mRNA_2771 mRNA_2772
11136
11137
11138
11139
11140
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 0.0 0.2 -0.9 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.4 0.1 -0.1 -0.2 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.4 0.2 -0.0 -0.6 0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -0.3 0.0 -0.1 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.5 -0.2 0.1 0.0 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 0.1 0.0 -0.2 0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 0.1 0.3 -0.0 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 -0.1 0.1 0.4 -0.3
auxotrophy Dropout Complete -0.2 -0.1 0.1 0.2 0.1
auxotrophy YNB Glucose 75mM Arginine -0.4 -0.2 0.1 0.3 0.4
ypd buoyancy 40 hrs High Buoyancy 0.2 -0.1 -0.1 0.2 -0.1
growth on ricinoleic acid YNB Glucose -0.0 0.1 -0.0 -0.1 0.2
ypd buoyancy 40 hrs Low Buoyancy -0.2 0.1 0.2 0.5 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 0.3 0.1 0.3 -0.5
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 -0.3 0.4 0.3 -0.1
growth on oleic acid YNB Glucose -0.1 -0.2 -0.2 0.4 0.5
auxotrophy YNB Glucose -0.2 -0.0 0.0 0.1 0.5
growth on oleic acid YNB Oleic Acid -0.1 -0.1 -0.1 0.7 0.1
ypd buoyancy 40 hrs Median Buoyancy 0.0 0.0 0.2 0.2 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.4 0.0 0.1 0.2 0.0
growth on ypd YPD -0.0 0.2 0.2 0.6 0.2
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