Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2767: 11135 - K10084 EDEM1 ER degradation enhancer, mannosidase alpha-like 1, at 166551 to 170333 11135 mRNA_2768: 11136 - K08681 pdxT, pdx2 5'-phosphate synthase pdxT subunit, at 170479 to 171341 11136 mRNA_2769: 11137 - K06215 pdxS, pdx1 pyridoxal 5'-phosphate synthase pdxS subunit, at 171565 to 173167 11137 mRNA_2770: 11138 - KOG0400 40S ribosomal protein S13, at 173510 to 175017 11138 mRNA_2771: 11139 - KOG4072 Signal peptidase complex, subunit SPC25, at 175827 to 177001 11139
Group Condition mRNA_2767 mRNA_2768 mRNA_2769 mRNA_2770 mRNA_2771
11135
11136
11137
11138
11139
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.4 0.2 -0.0 -0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.0 0.1 0.0 0.2 -0.9
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.5 -0.2 0.1 0.0
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.4 -0.2 0.1 0.3
facs on lipid accumulation Sorted No BODIPY Gate 0.3 -0.4 0.1 -0.1 -0.2
growth on oleic acid YNB Glucose 0.0 -0.1 -0.2 -0.2 0.4
auxotrophy YNB Glucose 0.0 -0.2 -0.0 0.0 0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.4 -0.0 -0.3 0.0 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 0.1 -0.3 0.4 0.3
auxotrophy Dropout Complete 0.0 -0.2 -0.1 0.1 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 0.0 0.1 0.0 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.2 0.2 -0.1 -0.1 0.2
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.2 0.1 0.2 0.5
growth on oleic acid YNB Oleic Acid -0.0 -0.1 -0.1 -0.1 0.7
growth on ricinoleic acid YNB Glucose 0.3 -0.0 0.1 -0.0 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0 -0.0 0.1 0.3 -0.0
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.0 0.0 0.2 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 0.1 -0.1 0.1 0.4
growth on ypd YPD -0.3 -0.0 0.2 0.2 0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 0.4 0.0 0.1 0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.2 0.1 0.3 0.1 0.3
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