Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2760: 11128 - HMMPfam-Acyltransferase-PF01553,SMART-Phosphate acyltransferases-SM00563,SUPERFAMILY--SSF69593, at 153952 to 156416 11128 mRNA_2761: 11129 - K00031 IDH1, IDH2, icd isocitrate dehydrogenase, at 157082 to 158929 11129 mRNA_2762: 11130 - BLAST Protein pof8 [Termitomyces sp. J132], at 159161 to 161620 11130 mRNA_2763: 11131 - Hypothetical Protein, at 161913 to 163067 11131 mRNA_2764: 11132 - Hypothetical Protein, at 163505 to 164257 11132
Group Condition mRNA_2760 mRNA_2761 mRNA_2762 mRNA_2763 mRNA_2764
11128
11129
11130
11131
11132
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 -1.8 0.0 -0.1 -0.0
auxotrophy YNB Glucose 75mM Methionine 0.2 -1.8 0.2 -0.3 -0.0
auxotrophy YNB Glucose 0.3 -1.7 -0.1 -0.4 0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.6 -0.3 0.0 -0.6
auxotrophy YNB Glucose 75mM Arginine 0.4 -0.8 -0.0 -0.5 -0.3
growth on oleic acid YNB Glucose 0.3 -1.4 0.0 0.1 -0.1
growth on ricinoleic acid YNB Glucose -0.3 -1.2 -0.3 -0.4 1.1
auxotrophy Dropout Complete -0.2 -0.5 0.2 -0.3 0.0
growth on ypd YPD -0.6 -0.1 -0.0 0.2 -0.0
facs on lipid accumulation Sorted No BODIPY Gate 0.1 -0.9 0.1 -0.0 0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.3 0.3 0.1 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 0.3 -0.1 -1.0 0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0 -0.9 0.2 0.4 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0 -0.3 0.0 -0.0 0.0
ypd buoyancy 40 hrs Low Buoyancy 0.3 -0.2 0.2 -0.5 0.1
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.3 0.2 -0.1 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 0.8 -0.3 -0.8 0.6
ypd buoyancy 40 hrs High Buoyancy 0.2 0.1 0.2 0.0 -0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.3 -0.9 0.1 0.5 0.4
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 0.3 0.1 0.2 -0.3
growth on oleic acid YNB Oleic Acid 0.1 0.3 -0.0 -0.2 0.5
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