Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2758: 11126 - Hypothetical Protein, at 150871 to 152585 11126 mRNA_2759: 11127 - K12158 NEDD8 ubiquitin-like protein Nedd8, at 152848 to 153537 11127 mRNA_2760: 11128 - HMMPfam-Acyltransferase-PF01553,SMART-Phosphate acyltransferases-SM00563,SUPERFAMILY--SSF69593, at 153952 to 156416 11128 mRNA_2761: 11129 - K00031 IDH1, IDH2, icd isocitrate dehydrogenase, at 157082 to 158929 11129 mRNA_2762: 11130 - BLAST Protein pof8 [Termitomyces sp. J132], at 159161 to 161620 11130
Group Condition mRNA_2758 mRNA_2759 mRNA_2760 mRNA_2761 mRNA_2762
11126
11127
11128
11129
11130
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2   -0.3 -1.8 0.0
growth on ricinoleic acid YNB Glucose -0.0   -0.3 -1.2 -0.3
auxotrophy YNB Glucose -0.1   0.3 -1.7 -0.1
auxotrophy YNB Glucose 75mM Methionine 0.1   0.2 -1.8 0.2
growth on oleic acid YNB Glucose 0.0   0.3 -1.4 0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.1   -0.0 -0.6 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.1   0.1 -0.9 0.1
auxotrophy Dropout Complete -0.1   -0.2 -0.5 0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2   0.0 -0.9 0.2
auxotrophy YNB Glucose 75mM Arginine 0.0   0.4 -0.8 -0.0
facs on lipid accumulation Sorted High BODIPY Gate 0.2   0.3 -0.9 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1   0.0 -0.3 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3   -0.3 -0.3 0.3
growth on ypd YPD 0.7   -0.6 -0.1 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0   -0.2 0.3 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.3   0.1 0.3 0.2
growth on oleic acid YNB Oleic Acid -0.1   0.1 0.3 -0.0
ypd buoyancy 40 hrs High Buoyancy -0.0   0.2 0.1 0.2
ypd buoyancy 40 hrs Low Buoyancy 0.3   0.3 -0.2 0.2
growth on ricinoleic acid YNB Ricinoleic Acid 0.2   -0.1 0.8 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation 0.0   0.2 0.3 0.1
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