Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2750: 11118 - K14962 WDR82, SWD2, CPS35 COMPASS component SWD2, at 134141 to 135893 11118 mRNA_2751: 11119 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047, at 136255 to 137508 11119 mRNA_2752: 11120 - HMMPfam-F-box-like-PF12937, at 138009 to 139329 11120 mRNA_2753: 11121 - HMMPfam-F-box-like-PF12937, at 139767 to 141011 11121 mRNA_2754: 11122 - SUPERFAMILY--SSF50249, at 141143 to 143248 11122
Group Condition mRNA_2750 mRNA_2751 mRNA_2752 mRNA_2753 mRNA_2754
11118
11119
11120
11121
11122
growth on ricinoleic acid YNB Ricinoleic Acid 0.5 -0.9 0.1 -0.3 -0.3
growth on ricinoleic acid YNB Glucose 0.1 -0.4 -0.1 -0.3 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 0.3 0.1 -0.3 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.3 0.2 -0.1 0.0
ypd buoyancy 40 hrs High Buoyancy 0.0 -0.1 0.1 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.6 0.2 -0.1 0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 0.7 -0.1 0.2 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 -0.2 0.3 -0.4 0.1
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.1 0.2 -0.1 0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 -0.2 0.0 -0.2 0.2
growth on ypd YPD 0.5 -0.1 0.1 -0.1 -0.4
auxotrophy YNB Glucose 75mM Methionine 0.3 -0.3 0.1 -0.1 -0.0
auxotrophy YNB Glucose 0.3 -0.2 0.1 -0.2 0.1
ypd buoyancy 40 hrs Low Buoyancy 0.2 -0.2 0.2 -0.2 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.6 -0.2 -0.1 -0.0 0.1
growth on oleic acid YNB Glucose 0.5 -0.1 0.2 -0.3 0.1
auxotrophy Dropout Complete 0.6 -0.1 -0.0 -0.1 0.1
auxotrophy YNB Glucose 75mM Arginine 0.2 -0.1 0.4 0.0 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.2 0.2 0.4 0.0 0.1
growth on oleic acid YNB Oleic Acid 0.6 0.0 -0.0 0.0 0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.1 0.7 0.3 0.0 -0.0
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