Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2742: 11110 - K18880 HCD1 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase, at 117665 to 118794 11110 mRNA_2743: 11111 - KOG4491 Predicted membrane protein, at 119009 to 120330 11111 mRNA_2744: 11112 - K20798 HENMT1 small RNA 2'-O-methyltransferase, at 120762 to 122799 11112 mRNA_2745: 11113 - HMMPfam-GlcNAc-PI de-N-acetylase-PF02585,SUPERFAMILY--SSF102588,SUPERFAMILY--SSF49785, at 123749 to 127463 11113 mRNA_2746: 11114 - K00859 coaE dephospho-CoA kinase, at 127700 to 128562 11114
Group Condition mRNA_2742 mRNA_2743 mRNA_2744 mRNA_2745 mRNA_2746
11110
11111
11112
11113
11114
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 -0.2 0.1 -0.2  
growth on ricinoleic acid YNB Ricinoleic Acid 0.0 -0.3 -0.3 -0.1  
growth on ricinoleic acid YNB Glucose 0.1 -0.2 -0.3 -0.2  
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.1 -0.2 -0.2  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 -0.2 -0.2 -0.2  
auxotrophy YNB Glucose 0.4 -0.3 -0.4 -0.1  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.2 0.1 -0.1  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.1 0.1 -0.0  
facs on lipid accumulation Sorted Low BODIPY Gate 0.3 -0.1 -0.3 -0.2  
auxotrophy YNB Glucose 75mM Arginine 0.3 -0.1 -0.3 -0.2  
growth on ypd YPD 0.0 -0.0 -0.1 -0.1  
ypd buoyancy 40 hrs High Buoyancy 0.0 -0.1 -0.0 -0.1  
auxotrophy YNB Glucose 75mM Methionine 0.2 -0.2 -0.1 -0.1  
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.3 0.0 0.1  
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.0 0.2 -0.1  
growth on oleic acid YNB Glucose 0.2 -0.2 -0.1 0.1  
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.1 0.3 0.0  
auxotrophy Dropout Complete 0.3 0.1 -0.2 -0.1  
growth on oleic acid YNB Oleic Acid 0.0 0.0 0.1 0.2  
facs on lipid accumulation Sorted No BODIPY Gate 0.6 0.0 -0.0 -0.2  
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 -0.1 0.6 0.1  
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