Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2741: 11109 - HMMPfam-Telomeric single stranded DNA binding POT1/CDC13-PF02765,SUPERFAMILY--SSF50249, at 114533 to 117473 11109 mRNA_2742: 11110 - K18880 HCD1 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase, at 117665 to 118794 11110 mRNA_2743: 11111 - KOG4491 Predicted membrane protein, at 119009 to 120330 11111 mRNA_2744: 11112 - K20798 HENMT1 small RNA 2'-O-methyltransferase, at 120762 to 122799 11112 mRNA_2745: 11113 - HMMPfam-GlcNAc-PI de-N-acetylase-PF02585,SUPERFAMILY--SSF102588,SUPERFAMILY--SSF49785, at 123749 to 127463 11113
Group Condition mRNA_2741 mRNA_2742 mRNA_2743 mRNA_2744 mRNA_2745
11109
11110
11111
11112
11113
facs on lipid accumulation Sorted High BODIPY Gate -2.8 -0.1 -0.1 -0.2 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -2.5 0.3 -0.1 -0.3 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -3.0 0.2 -0.1 0.6 0.1
ypd buoyancy 40 hrs High Buoyancy -0.9 0.0 -0.1 -0.0 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.1 -0.2 0.1 -0.1
growth on ypd YPD -0.2 0.0 -0.0 -0.1 -0.1
growth on ricinoleic acid YNB Glucose 0.3 0.1 -0.2 -0.3 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.5 -0.4 -0.2 0.1 -0.2
auxotrophy YNB Glucose 0.2 0.4 -0.3 -0.4 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 -0.3 -0.1 0.1 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.6 0.6 0.0 -0.0 -0.2
ypd buoyancy 40 hrs Low Buoyancy 0.2 0.1 -0.3 0.0 0.1
growth on oleic acid YNB Glucose 0.2 0.2 -0.2 -0.1 0.1
auxotrophy YNB Glucose 75mM Arginine 0.6 0.3 -0.1 -0.3 -0.2
ypd buoyancy 40 hrs Median Buoyancy 0.4 -0.1 -0.0 0.2 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid 1.2 0.0 -0.3 -0.3 -0.1
auxotrophy YNB Glucose 75mM Methionine 0.8 0.2 -0.2 -0.1 -0.1
auxotrophy Dropout Complete 0.6 0.3 0.1 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.8 -0.2 -0.1 0.3 0.0
growth on ricinoleic acid YNB Methylricinoleic Acid 1.8 0.1 -0.2 -0.2 -0.2
growth on oleic acid YNB Oleic Acid 1.3 0.0 0.0 0.1 0.2
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