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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_2739: 11107 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 109775 to 112160
11107
mRNA_2740: 11108 - HMMPfam-SUR7/PalI family-PF06687, at 113053 to 114206
11108
mRNA_2741: 11109 - HMMPfam-Telomeric single stranded DNA binding POT1/CDC13-PF02765,SUPERFAMILY--SSF50249, at 114533 to 117473
11109
mRNA_2742: 11110 - K18880 HCD1 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase, at 117665 to 118794
11110
mRNA_2743: 11111 - KOG4491 Predicted membrane protein, at 119009 to 120330
11111
Group
Condition
mRNA_2739
mRNA_2740
mRNA_2741
mRNA_2742
mRNA_2743
11107
11108
11109
11110
11111
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
-0.5
-2.8
-0.1
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.0
-0.7
-2.5
0.3
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
0.7
-3.0
0.2
-0.1
growth on ypd
YPD
-0.1
-1.0
-0.2
0.0
-0.0
ypd buoyancy
40 hrs High Buoyancy
-0.1
0.4
-0.9
0.0
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
-0.2
0.5
-0.4
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
0.0
-0.2
-0.1
-0.2
growth on oleic acid
YNB Glucose
-0.2
-0.5
0.2
0.2
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.4
0.1
0.2
0.1
-0.3
auxotrophy
YNB Glucose
-0.0
-0.5
0.2
0.4
-0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.3
-0.2
0.4
-0.1
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.2
-0.1
0.2
-0.3
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
-0.2
-0.6
0.6
0.0
growth on ricinoleic acid
YNB Glucose
0.0
-0.2
0.3
0.1
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
-0.2
0.8
-0.2
-0.1
auxotrophy
YNB Glucose 75mM Arginine
0.1
-0.6
0.6
0.3
-0.1
growth on oleic acid
YNB Oleic Acid
-0.2
-0.8
1.3
0.0
0.0
auxotrophy
YNB Glucose 75mM Methionine
0.1
-0.6
0.8
0.2
-0.2
auxotrophy
Dropout Complete
0.1
-0.6
0.6
0.3
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
-0.2
1.2
0.0
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.3
-0.9
1.8
0.1
-0.2
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