Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2739: 11107 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 109775 to 112160 11107 mRNA_2740: 11108 - HMMPfam-SUR7/PalI family-PF06687, at 113053 to 114206 11108 mRNA_2741: 11109 - HMMPfam-Telomeric single stranded DNA binding POT1/CDC13-PF02765,SUPERFAMILY--SSF50249, at 114533 to 117473 11109 mRNA_2742: 11110 - K18880 HCD1 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase, at 117665 to 118794 11110 mRNA_2743: 11111 - KOG4491 Predicted membrane protein, at 119009 to 120330 11111
Group Condition mRNA_2739 mRNA_2740 mRNA_2741 mRNA_2742 mRNA_2743
11107
11108
11109
11110
11111
facs on lipid accumulation Sorted High BODIPY Gate 0.1 -0.5 -2.8 -0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.0 -0.7 -2.5 0.3 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 0.7 -3.0 0.2 -0.1
growth on ypd YPD -0.1 -1.0 -0.2 0.0 -0.0
ypd buoyancy 40 hrs High Buoyancy -0.1 0.4 -0.9 0.0 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.2 0.5 -0.4 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 0.0 -0.2 -0.1 -0.2
growth on oleic acid YNB Glucose -0.2 -0.5 0.2 0.2 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.4 0.1 0.2 0.1 -0.3
auxotrophy YNB Glucose -0.0 -0.5 0.2 0.4 -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.3 -0.2 0.4 -0.1 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 -0.1 0.2 -0.3 -0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.1 -0.2 -0.6 0.6 0.0
growth on ricinoleic acid YNB Glucose 0.0 -0.2 0.3 0.1 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.2 0.8 -0.2 -0.1
auxotrophy YNB Glucose 75mM Arginine 0.1 -0.6 0.6 0.3 -0.1
growth on oleic acid YNB Oleic Acid -0.2 -0.8 1.3 0.0 0.0
auxotrophy YNB Glucose 75mM Methionine 0.1 -0.6 0.8 0.2 -0.2
auxotrophy Dropout Complete 0.1 -0.6 0.6 0.3 0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -0.2 1.2 0.0 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid 0.3 -0.9 1.8 0.1 -0.2
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