Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2737: 11105 - K09584 PDIA6, TXNDC7 protein disulfide-isomerase A6, at 105128 to 106332 11105 mRNA_2738: 11106 - K20121 FNBP1 formin-binding protein 1, at 107722 to 109356 11106 mRNA_2739: 11107 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 109775 to 112160 11107 mRNA_2740: 11108 - HMMPfam-SUR7/PalI family-PF06687, at 113053 to 114206 11108 mRNA_2741: 11109 - HMMPfam-Telomeric single stranded DNA binding POT1/CDC13-PF02765,SUPERFAMILY--SSF50249, at 114533 to 117473 11109
Group Condition mRNA_2737 mRNA_2738 mRNA_2739 mRNA_2740 mRNA_2741
11105
11106
11107
11108
11109
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 0.1 0.0 -0.7 -2.5
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 -0.0 -0.2 0.7 -3.0
facs on lipid accumulation Sorted High BODIPY Gate -0.1 0.5 0.1 -0.5 -2.8
growth on ypd YPD -0.1 0.1 -0.1 -1.0 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.5 -0.1 0.4 -0.9
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 -0.4 -0.0 0.0 -0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.4 -0.1 0.1 -0.2 -0.6
growth on oleic acid YNB Glucose -0.1 0.3 -0.2 -0.5 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.3 -0.0 -0.2 0.8
ypd buoyancy 40 hrs Median Buoyancy 0.2 -0.2 -0.3 -0.2 0.4
growth on oleic acid YNB Oleic Acid -0.2 -0.1 -0.2 -0.8 1.3
auxotrophy YNB Glucose -0.0 0.4 -0.0 -0.5 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 0.1 -0.3 -0.2 0.5
growth on ricinoleic acid YNB Glucose -0.3 0.3 0.0 -0.2 0.3
auxotrophy Dropout Complete -0.1 0.3 0.1 -0.6 0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 -0.2 0.2 -0.1 0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.9 0.2 -0.0 -0.2 1.2
auxotrophy YNB Glucose 75mM Arginine -0.1 0.4 0.1 -0.6 0.6
ypd buoyancy 40 hrs Low Buoyancy 0.6 -0.0 -0.4 0.1 0.2
auxotrophy YNB Glucose 75mM Methionine 0.0 0.3 0.1 -0.6 0.8
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 0.2 0.3 -0.9 1.8
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