Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2735: 11103 - K02257 COX10 protoheme IX farnesyltransferase, at 101262 to 102881 11103 mRNA_2736: 11104 - K11093 SNRP70 U1 small nuclear ribonucleoprotein 70kDa, at 103067 to 104847 11104 mRNA_2737: 11105 - K09584 PDIA6, TXNDC7 protein disulfide-isomerase A6, at 105128 to 106332 11105 mRNA_2738: 11106 - K20121 FNBP1 formin-binding protein 1, at 107722 to 109356 11106 mRNA_2739: 11107 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 109775 to 112160 11107
Group Condition mRNA_2735 mRNA_2736 mRNA_2737 mRNA_2738 mRNA_2739
11103
11104
11105
11106
11107
ypd buoyancy 40 hrs No Buoyancy Separation     -0.6 -0.0 -0.2
ypd buoyancy 40 hrs High Buoyancy     -0.1 -0.5 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy     -0.4 -0.3 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid     -0.9 0.2 -0.0
growth on oleic acid YNB Oleic Acid     -0.2 -0.1 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate     -0.5 0.1 0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy     0.1 -0.4 -0.0
ypd buoyancy 40 hrs Median Buoyancy     0.2 -0.2 -0.3
growth on ypd YPD     -0.1 0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy     0.1 0.1 -0.3
growth on oleic acid YNB Glucose     -0.1 0.3 -0.2
growth on ricinoleic acid YNB Glucose     -0.3 0.3 0.0
ypd buoyancy 40 hrs Low Buoyancy     0.6 -0.0 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation     0.2 -0.2 0.2
auxotrophy Dropout Complete     -0.1 0.3 0.1
auxotrophy YNB Glucose     -0.0 0.4 -0.0
auxotrophy YNB Glucose 75mM Arginine     -0.1 0.4 0.1
facs on lipid accumulation Sorted No BODIPY Gate     0.4 -0.1 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid     -0.0 0.2 0.3
facs on lipid accumulation Sorted High BODIPY Gate     -0.1 0.5 0.1
auxotrophy YNB Glucose 75mM Methionine     0.0 0.3 0.1
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