Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_2734: 11102 - K14779 DDX52, ROK1 ATP-dependent RNA helicase DDX52/ROK1, at 98768 to 101128 11102 mRNA_2735: 11103 - K02257 COX10 protoheme IX farnesyltransferase, at 101262 to 102881 11103 mRNA_2736: 11104 - K11093 SNRP70 U1 small nuclear ribonucleoprotein 70kDa, at 103067 to 104847 11104 mRNA_2737: 11105 - K09584 PDIA6, TXNDC7 protein disulfide-isomerase A6, at 105128 to 106332 11105 mRNA_2738: 11106 - K20121 FNBP1 formin-binding protein 1, at 107722 to 109356 11106
Group Condition mRNA_2734 mRNA_2735 mRNA_2736 mRNA_2737 mRNA_2738
11102
11103
11104
11105
11106
growth on ricinoleic acid YNB Ricinoleic Acid       -0.9 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy       -0.4 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation       -0.6 -0.0
ypd buoyancy 40 hrs High Buoyancy       -0.1 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate       -0.5 0.1
growth on oleic acid YNB Oleic Acid       -0.2 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy       0.1 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation       0.2 -0.2
growth on ypd YPD       -0.1 0.1
growth on ricinoleic acid YNB Glucose       -0.3 0.3
ypd buoyancy 40 hrs Median Buoyancy       0.2 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid       -0.0 0.2
growth on oleic acid YNB Glucose       -0.1 0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy       0.1 0.1
auxotrophy Dropout Complete       -0.1 0.3
auxotrophy YNB Glucose 75mM Arginine       -0.1 0.4
facs on lipid accumulation Sorted No BODIPY Gate       0.4 -0.1
auxotrophy YNB Glucose       -0.0 0.4
auxotrophy YNB Glucose 75mM Methionine       0.0 0.3
facs on lipid accumulation Sorted High BODIPY Gate       -0.1 0.5
ypd buoyancy 40 hrs Low Buoyancy       0.6 -0.0
remove
mRNA_2734
plot		 remove
mRNA_2735
plot		 remove
mRNA_2736		 remove
mRNA_2737
plot		 remove
mRNA_2738
plot