Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2725: 11093 - HMMPfam-NADH-ubiquinone reductase complex 1 MLRQ subunit-PF06522, at 83546 to 84542 11093 mRNA_2726: 11094 - K01725 cynS cyanate lyase, at 84881 to 85852 11094 mRNA_2727: 11095 - Hypothetical Protein, at 86121 to 88745 11095 mRNA_2728: 11096 - Hypothetical Protein, at 89021 to 89898 11096 mRNA_2729: 11097 - KOG1485 Mitochondrial Fe2+ transporter MMT1 and related transporters (cation diffusion facilitator superfamily), at 90358 to 92251 11097
Group Condition mRNA_2725 mRNA_2726 mRNA_2727 mRNA_2728 mRNA_2729
11093
11094
11095
11096
11097
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -1.4 0.3 0.1 0.7
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.3 -0.1 -0.2 0.2
growth on oleic acid YNB Glucose 0.1 0.1 -0.3 -0.1 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.1 -0.3 -0.3 0.5
growth on oleic acid YNB Oleic Acid 0.1 -0.1 -0.1 -0.4 0.1
auxotrophy Dropout Complete 0.1 0.1 -0.2 0.0 -0.4
auxotrophy YNB Glucose 75mM Methionine -0.0 0.4 -0.2 -0.2 -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.1 0.1 -0.2 0.1
ypd buoyancy 40 hrs Median Buoyancy -0.4 -0.2 0.2 0.0 0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.0 0.2 0.4 0.2 -0.8
auxotrophy YNB Glucose 75mM Arginine -0.1 0.4 0.0 0.1 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 0.1 0.0 0.4 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 0.1 -0.1 -0.1 0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3 0.2 0.2 0.2 -0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 0.3 0.4 -0.2 -0.2
auxotrophy YNB Glucose -0.1 0.5 -0.1 0.1 -0.0
growth on ypd YPD -0.1 -0.0 0.2 0.4 0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.1 -0.2 0.3 0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 0.5 0.3 0.3 -0.1
growth on ricinoleic acid YNB Glucose -0.1 0.1 0.2 -0.1 1.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 0.6 0.3 0.2 0.1
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