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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_2725: 11093 - HMMPfam-NADH-ubiquinone reductase complex 1 MLRQ subunit-PF06522, at 83546 to 84542
11093
mRNA_2726: 11094 - K01725 cynS cyanate lyase, at 84881 to 85852
11094
mRNA_2727: 11095 - Hypothetical Protein, at 86121 to 88745
11095
mRNA_2728: 11096 - Hypothetical Protein, at 89021 to 89898
11096
mRNA_2729: 11097 - KOG1485 Mitochondrial Fe2+ transporter MMT1 and related transporters (cation diffusion facilitator superfamily), at 90358 to 92251
11097
Group
Condition
mRNA_2725
mRNA_2726
mRNA_2727
mRNA_2728
mRNA_2729
11093
11094
11095
11096
11097
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
-1.4
0.3
0.1
0.7
ypd buoyancy
40 hrs High Buoyancy
-0.2
-0.3
-0.1
-0.2
0.2
growth on oleic acid
YNB Glucose
0.1
0.1
-0.3
-0.1
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.1
-0.3
-0.3
0.5
growth on oleic acid
YNB Oleic Acid
0.1
-0.1
-0.1
-0.4
0.1
auxotrophy
Dropout Complete
0.1
0.1
-0.2
0.0
-0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.0
0.4
-0.2
-0.2
-0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.1
0.1
-0.2
0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.4
-0.2
0.2
0.0
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
0.2
0.4
0.2
-0.8
auxotrophy
YNB Glucose 75mM Arginine
-0.1
0.4
0.0
0.1
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
0.1
0.0
0.4
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
0.1
-0.1
-0.1
0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.3
0.2
0.2
0.2
-0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
0.3
0.4
-0.2
-0.2
auxotrophy
YNB Glucose
-0.1
0.5
-0.1
0.1
-0.0
growth on ypd
YPD
-0.1
-0.0
0.2
0.4
0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
-0.1
-0.2
0.3
0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
0.5
0.3
0.3
-0.1
growth on ricinoleic acid
YNB Glucose
-0.1
0.1
0.2
-0.1
1.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.2
0.6
0.3
0.2
0.1
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