Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2635: 11003 - KOG2615 Permease of the major facilitator superfamily, at 644639 to 646229 11003 mRNA_2636: 11004 - K01303 APEH acylaminoacyl-peptidase, at 646481 to 649252 11004 mRNA_2637: 11005 - HMMPfam-Sulphur transport-PF04143,HMMPfam-Domain of unknown function (DUF4341)-PF14241, at 649432 to 650669 11005 mRNA_2638: 11006 - SMART-heat shock factor-SM00415, at 650946 to 653673 11006 mRNA_2639: 11007 - HMMPfam-Glycosyl hydrolase family 26-PF02156,SUPERFAMILY--SSF51445, at 654513 to 656042 11007
Group Condition mRNA_2635 mRNA_2636 mRNA_2637 mRNA_2638 mRNA_2639
11003
11004
11005
11006
11007
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.0 -0.0 -0.1 -0.8
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.3 -0.1 -0.2 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 -0.0 -0.4 0.4 -0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.3 -0.2 -0.2 -0.1
growth on ricinoleic acid YNB Glucose -0.3 0.1 -0.3 -0.1 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 0.1 -0.0 -0.0 -0.6
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.0 -0.1 -0.0 -0.3
auxotrophy Dropout Complete -0.3 0.1 -0.1 -0.1 -0.1
growth on oleic acid YNB Glucose 0.0 0.1 -0.1 -0.3 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.1 0.0 0.2 -0.0
ypd buoyancy 40 hrs High Buoyancy -0.4 0.2 0.1 0.1 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.1 0.1 0.0 -0.2 0.1
auxotrophy YNB Glucose -0.1 0.1 0.0 -0.0 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1 0.1 -0.1 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 0.1 -0.2 0.1 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.5 -0.0 -0.3 -0.0 -0.1
growth on oleic acid YNB Oleic Acid 0.1 0.1 0.0 -0.2 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.1 0.0 0.1 0.1 0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 0.1 -0.1 0.3 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3 0.1 -0.2 0.2 0.1
growth on ypd YPD 0.2 0.2 0.0 0.1 0.0
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