Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2630: 10998 - KOG1581 UDP-galactose transporter related protein, at 629452 to 632288 10998 mRNA_2631: 10999 - K14803 PTC2_3 protein phosphatase PTC2/3, at 632765 to 634825 10999 mRNA_2632: 11000 - Hypothetical Protein, at 636103 to 638450 11000 mRNA_2633: 11001 - HMMPfam-Nucleotidyl transferase-PF00483,SUPERFAMILY--SSF53448,SUPERFAMILY--SSF56112,SUPERFAMILY--SSF56784, at 638578 to 641420 11001 mRNA_2634: 11002 - KOG2234 Predicted UDP-galactose transporter, at 641734 to 644523 11002
Group Condition mRNA_2630 mRNA_2631 mRNA_2632 mRNA_2633 mRNA_2634
10998
10999
11000
11001
11002
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -1.5 0.1 0.1 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -1.4 0.3 -0.0 -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.0 -1.2 -0.0 -0.0 -0.1
growth on oleic acid YNB Oleic Acid -0.3 -0.9 -0.0 0.0 0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 -0.5 -0.0 0.0 -0.1
growth on ypd YPD -0.1 -0.4 -0.4 0.1 0.1
growth on oleic acid YNB Glucose -0.4 0.0 -0.1 -0.1 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.1 -0.1 0.1 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.6 0.1 0.1 0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.3 0.1 0.1 -0.3
auxotrophy Dropout Complete -0.3 0.1 0.0 -0.2 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 0.2 0.0 -0.0 -0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.0 0.2 -0.3 -0.1 0.0
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.1 0.2 -0.0 0.2
growth on ricinoleic acid YNB Glucose -0.4 0.2 0.1 0.0 0.1
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.0 0.0 0.1 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 0.2 0.1 -0.0 -0.1
ypd buoyancy 40 hrs High Buoyancy 0.3 -0.1 0.2 -0.0 -0.0
auxotrophy YNB Glucose -0.1 0.1 0.2 0.1 0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.0 0.5 -0.1 0.3 0.1
auxotrophy YNB Glucose 75mM Methionine -0.0 0.4 0.3 0.1 0.3
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