Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2626: 10994 - Interpro GDP-fucose protein O-fucosyltransferase, at 621778 to 623321 10994 mRNA_2627: 10995 - K05941 E2.3.2.15 glutathione gamma-glutamylcysteinyltransferase, at 624250 to 625308 10995 mRNA_2628: 10996 - K09468 MSN2_4 zinc finger protein MSN2/4, at 625936 to 628159 10996 mRNA_2629: 10997 - Hypothetical Protein, at 628565 to 629191 10997 mRNA_2630: 10998 - KOG1581 UDP-galactose transporter related protein, at 629452 to 632288 10998
Group Condition mRNA_2626 mRNA_2627 mRNA_2628 mRNA_2629 mRNA_2630
10994
10995
10996
10997
10998
auxotrophy Dropout Complete 0.1 -0.5 -0.2 -0.6 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.7 0.0 -0.2 -0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine 0.1 -0.2 -0.2 -0.4 -0.2
growth on oleic acid YNB Glucose -0.0 -0.4 -0.2 0.2 -0.4
growth on oleic acid YNB Oleic Acid 0.1 -0.6 0.1 -0.0 -0.3
auxotrophy YNB Glucose 0.3 0.0 -0.4 -0.4 -0.1
growth on ypd YPD 0.1 0.4 -0.2 -0.7 -0.1
auxotrophy YNB Glucose 75mM Methionine 0.2 -0.5 -0.1 -0.1 -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.3 0.1 -0.3 0.0 -0.0
ypd buoyancy 40 hrs High Buoyancy -0.5 -0.2 -0.1 0.0 0.3
growth on ricinoleic acid YNB Glucose -0.0 -0.4 0.0 0.4 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 0.4 -0.2 -0.2 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.5 0.0 0.6 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 0.0 -0.2 0.1 -0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.1 0.1 0.1 -0.2 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 0.4 -0.1 0.1 -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.0 0.1 -0.2 -0.1 0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.2 0.5 0.5 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 0.3 0.0 0.1 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 0.3 0.5 0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.1 0.3 0.0 0.2 0.0
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