Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2619: 10987 - Hypothetical Protein, at 608244 to 608759 10987 mRNA_2620: 10988 - ProSiteProfiles-Filamin/ABP280 repeat profile.-PS50194,SUPERFAMILY--SSF81296, at 609303 to 611052 10988 mRNA_2621: 10989 - K01711 gmd, GMDS GDPmannose 4,6-dehydratase, at 611391 to 613373 10989 mRNA_2622: 10990 - BLAST expressed protein [Schizophyllum commune H4-8], at 613719 to 614794 10990 mRNA_2623: 10991 - K00306 PIPOX sarcosine oxidase / L-pipecolate oxidase, at 615105 to 616887 10991
Group Condition mRNA_2619 mRNA_2620 mRNA_2621 mRNA_2622 mRNA_2623
10987
10988
10989
10990
10991
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 -0.3 -0.1 -0.2 -0.5
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.1 -0.1 0.1 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3 0.3 -0.0 -0.2 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.3 -0.0 -0.1 -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.0 -0.2 -0.1 0.4
auxotrophy YNB Glucose -0.1 0.2 0.4 -0.4 0.0
auxotrophy YNB Glucose 75mM Arginine -0.2 0.1 0.4 -0.0 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 0.5 0.2 -0.1 -0.5
auxotrophy Dropout Complete -0.1 -0.0 0.4 -0.3 0.3
growth on ricinoleic acid YNB Glucose -0.1 0.1 0.6 -0.2 -0.2
growth on oleic acid YNB Glucose -0.0 0.2 0.3 0.1 -0.2
growth on ypd YPD 0.1 0.2 0.2 -0.2 0.3
ypd buoyancy 40 hrs High Buoyancy 0.2 -0.1 0.0 -0.0 0.3
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.1 0.4 0.1 0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.2 0.2 0.2 -0.0 0.0
growth on oleic acid YNB Oleic Acid -0.1 -0.1 0.5 0.3 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.1 0.2 0.4 -0.1 0.3
facs on lipid accumulation Sorted High BODIPY Gate 0.4 0.2 0.5 0.2 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 0.6 0.5 0.2 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 0.1 1.2 0.4 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 0.0 1.7 0.3 0.1
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