Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2585: 10953 - K18167 SDHAF1 succinate dehydrogenase assembly factor 1, at 503292 to 503677 10953 mRNA_2586: 10954 - K05765 CFL cofilin, at 503771 to 504788 10954 mRNA_2587: 10955 - K04368 MAP2K1, MEK1 mitogen-activated protein kinase kinase 1, at 543076 to 544917 10955 mRNA_2588: 10956 - K03246 EIF3I translation initiation factor 3 subunit I, at 545209 to 547043 10956 mRNA_2589: 10957 - Hypothetical Protein, at 547993 to 548642 10957
Group Condition mRNA_2585 mRNA_2586 mRNA_2587 mRNA_2588 mRNA_2589
10953
10954
10955
10956
10957
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2   -4.8   0.1
growth on ricinoleic acid YNB Glucose -0.2   -3.9   0.2
growth on ricinoleic acid YNB Ricinoleic Acid 1.1   -5.0   0.6
facs on lipid accumulation Sorted Low BODIPY Gate -1.1   -2.4   0.3
growth on oleic acid YNB Glucose -0.3   -3.0   0.2
growth on oleic acid YNB Oleic Acid -0.9   -2.0   -0.2
auxotrophy YNB Glucose -0.1   -3.6   0.7
auxotrophy YNB Glucose 75mM Arginine 0.1   -2.8   0.2
auxotrophy Dropout Complete -0.7   -1.9   0.7
ypd buoyancy 40 hrs Low Buoyancy -0.3   -1.0   -0.6
auxotrophy YNB Glucose 75mM Methionine 0.4   -2.9   0.8
facs on lipid accumulation Sorted High BODIPY Gate 0.2   -2.1   0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.2   -2.0   0.2
growth on ypd YPD 0.6   -2.6   0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy -1.1   0.0   -0.0
ypd buoyancy 40 hrs High Buoyancy 0.2   -0.5   -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5   -0.5   0.3
ypd buoyancy 40 hrs Median Buoyancy -0.1   0.3   -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.8   -0.0   0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3   0.8   0.2
ypd buoyancy 40 hrs No Buoyancy Separation 0.3   1.7   -0.3
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