Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2584: 10952 - K12350 SMPD1, ASM sphingomyelin phosphodiesterase, at 499644 to 502553 10952 mRNA_2585: 10953 - K18167 SDHAF1 succinate dehydrogenase assembly factor 1, at 503292 to 503677 10953 mRNA_2586: 10954 - K05765 CFL cofilin, at 503771 to 504788 10954 mRNA_2587: 10955 - K04368 MAP2K1, MEK1 mitogen-activated protein kinase kinase 1, at 543076 to 544917 10955 mRNA_2588: 10956 - K03246 EIF3I translation initiation factor 3 subunit I, at 545209 to 547043 10956
Group Condition mRNA_2584 mRNA_2585 mRNA_2586 mRNA_2587 mRNA_2588
10952
10953
10954
10955
10956
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 0.2   -4.8  
growth on ricinoleic acid YNB Glucose 0.1 -0.2   -3.9  
growth on ricinoleic acid YNB Ricinoleic Acid 0.3 1.1   -5.0  
auxotrophy YNB Glucose 0.3 -0.1   -3.6  
facs on lipid accumulation Sorted Low BODIPY Gate 0.3 -1.1   -2.4  
growth on oleic acid YNB Glucose 0.2 -0.3   -3.0  
growth on oleic acid YNB Oleic Acid 0.2 -0.9   -2.0  
auxotrophy YNB Glucose 75mM Arginine 0.2 0.1   -2.8  
auxotrophy Dropout Complete 0.2 -0.7   -1.9  
facs on lipid accumulation Sorted High BODIPY Gate -0.2 0.2   -2.1  
auxotrophy YNB Glucose 75mM Methionine 0.4 0.4   -2.9  
growth on ypd YPD 0.2 0.6   -2.6  
facs on lipid accumulation Sorted No BODIPY Gate 0.1 0.2   -2.0  
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.3   -1.0  
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.5   -0.5  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.8   -0.0  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 -1.1   0.0  
ypd buoyancy 40 hrs High Buoyancy -0.0 0.2   -0.5  
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1   0.3  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3 -0.3   0.8  
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 0.3   1.7  
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