Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2583: 10951 - K10610 DDB1 DNA damage-binding protein 1, at 495200 to 499404 10951 mRNA_2584: 10952 - K12350 SMPD1, ASM sphingomyelin phosphodiesterase, at 499644 to 502553 10952 mRNA_2585: 10953 - K18167 SDHAF1 succinate dehydrogenase assembly factor 1, at 503292 to 503677 10953 mRNA_2586: 10954 - K05765 CFL cofilin, at 503771 to 504788 10954 mRNA_2587: 10955 - K04368 MAP2K1, MEK1 mitogen-activated protein kinase kinase 1, at 543076 to 544917 10955
Group Condition mRNA_2583 mRNA_2584 mRNA_2585 mRNA_2586 mRNA_2587
10951
10952
10953
10954
10955
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 0.2 0.2   -4.8
growth on ricinoleic acid YNB Ricinoleic Acid -0.8 0.3 1.1   -5.0
growth on ricinoleic acid YNB Glucose -0.3 0.1 -0.2   -3.9
auxotrophy YNB Glucose -0.3 0.3 -0.1   -3.6
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 0.3 -1.1   -2.4
growth on oleic acid YNB Glucose -0.2 0.2 -0.3   -3.0
auxotrophy Dropout Complete -0.6 0.2 -0.7   -1.9
growth on oleic acid YNB Oleic Acid -0.4 0.2 -0.9   -2.0
auxotrophy YNB Glucose 75mM Arginine -0.3 0.2 0.1   -2.8
auxotrophy YNB Glucose 75mM Methionine -0.2 0.4 0.4   -2.9
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.2 0.2   -2.1
facs on lipid accumulation Sorted No BODIPY Gate -0.4 0.1 0.2   -2.0
growth on ypd YPD -0.0 0.2 0.6   -2.6
ypd buoyancy 40 hrs Low Buoyancy -0.4 -0.0 -0.3   -1.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.1 -0.5   -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 -0.1 -0.8   -0.0
ypd buoyancy 40 hrs High Buoyancy -0.3 -0.0 0.2   -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 0.2 -1.1   0.0
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1 -0.1   0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0 0.3 -0.3   0.8
ypd buoyancy 40 hrs No Buoyancy Separation 0.0 -0.2 0.3   1.7
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