Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2581: 10949 - K06096 VAPA vesicle-associated membrane protein-associated protein A, at 492942 to 494422 10949 mRNA_2582: 10950 - HMMPfam-Ribosomal protein L35-PF01632,PRINTS-Ribosomal protein L35 signature-PR00064,ProSitePatterns-Ribosomal protein L35 signature.-PS00936,SUPERFAMILY--SSF143034, at 494471 to 495097 10950 mRNA_2583: 10951 - K10610 DDB1 DNA damage-binding protein 1, at 495200 to 499404 10951 mRNA_2584: 10952 - K12350 SMPD1, ASM sphingomyelin phosphodiesterase, at 499644 to 502553 10952 mRNA_2585: 10953 - K18167 SDHAF1 succinate dehydrogenase assembly factor 1, at 503292 to 503677 10953
Group Condition mRNA_2581 mRNA_2582 mRNA_2583 mRNA_2584 mRNA_2585
10949
10950
10951
10952
10953
growth on oleic acid YNB Oleic Acid -0.1 -0.6 -0.4 0.2 -0.9
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 -0.2 -0.3 0.3 -1.1
auxotrophy Dropout Complete -0.5 0.0 -0.6 0.2 -0.7
ypd buoyancy 40 hrs Low Buoyancy -0.4 -0.3 -0.4 -0.0 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 0.2 0.2 0.2 -1.1
growth on oleic acid YNB Glucose -0.4 -0.1 -0.2 0.2 -0.3
growth on ricinoleic acid YNB Glucose -0.3 -0.2 -0.3 0.1 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.6 -0.6 0.2 0.2
auxotrophy YNB Glucose 75mM Arginine -0.7 0.1 -0.3 0.2 0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -1.1 -0.8 0.3 1.1
facs on lipid accumulation Sorted No BODIPY Gate -0.4 -0.0 -0.4 0.1 0.2
ypd buoyancy 40 hrs Median Buoyancy 0.1 -0.2 -0.1 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.4 0.6 -0.3 -0.1 -0.8
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.4 0.4 -0.4 -0.1 -0.5
ypd buoyancy 40 hrs High Buoyancy 0.2 0.1 -0.3 -0.0 0.2
auxotrophy YNB Glucose -0.3 0.5 -0.3 0.3 -0.1
growth on ypd YPD -0.3 -0.1 -0.0 0.2 0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 0.2 0.0 0.3 -0.3
facs on lipid accumulation Sorted High BODIPY Gate 0.4 0.1 -0.0 -0.2 0.2
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 0.3 0.0 -0.2 0.3
auxotrophy YNB Glucose 75mM Methionine -0.4 0.3 -0.2 0.4 0.4
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