Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2580: 10948 - SUPERFAMILY--SSF52266, at 490712 to 492348 10948 mRNA_2581: 10949 - K06096 VAPA vesicle-associated membrane protein-associated protein A, at 492942 to 494422 10949 mRNA_2582: 10950 - HMMPfam-Ribosomal protein L35-PF01632,PRINTS-Ribosomal protein L35 signature-PR00064,ProSitePatterns-Ribosomal protein L35 signature.-PS00936,SUPERFAMILY--SSF143034, at 494471 to 495097 10950 mRNA_2583: 10951 - K10610 DDB1 DNA damage-binding protein 1, at 495200 to 499404 10951 mRNA_2584: 10952 - K12350 SMPD1, ASM sphingomyelin phosphodiesterase, at 499644 to 502553 10952
Group Condition mRNA_2580 mRNA_2581 mRNA_2582 mRNA_2583 mRNA_2584
10948
10949
10950
10951
10952
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 -0.1 -1.1 -0.8 0.3
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.4 -0.3 -0.4 -0.0
growth on oleic acid YNB Oleic Acid -0.3 -0.1 -0.6 -0.4 0.2
auxotrophy Dropout Complete -0.1 -0.5 0.0 -0.6 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 -0.1 -0.6 -0.6 0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.4 -0.2 -0.3 0.3
auxotrophy YNB Glucose 75mM Arginine 0.1 -0.7 0.1 -0.3 0.2
growth on oleic acid YNB Glucose 0.0 -0.4 -0.1 -0.2 0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.2 -0.4 -0.0 -0.4 0.1
growth on ricinoleic acid YNB Glucose 0.1 -0.3 -0.2 -0.3 0.1
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.1 -0.2 -0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 0.2 0.1 -0.3 -0.0
growth on ypd YPD 0.2 -0.3 -0.1 -0.0 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.6 0.2 0.2 0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.2 0.4 0.1 -0.0 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.4 0.3 -0.2 0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 0.4 0.4 -0.4 -0.1
auxotrophy YNB Glucose -0.0 -0.3 0.5 -0.3 0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 0.2 0.2 0.0 0.3
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 0.2 0.3 0.0 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.4 0.6 -0.3 -0.1
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