Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2575: 10943 - KOG1022 Acetylglucosaminyltransferase EXT2/exostosin 2, at 479011 to 480812 10943 mRNA_2576: 10944 - Hypothetical Protein, at 480885 to 482213 10944 mRNA_2577: 10945 - HMMPfam-Protein of unknown function (DUF3767)-PF12597, at 482367 to 483175 10945 mRNA_2578: 10946 - KOG3574 Acetyl-CoA transporter, at 483636 to 486060 10946 mRNA_2579: 10947 - K10597 UBE4B, UFD2 ubiquitin conjugation factor E4 B, at 486195 to 490612 10947
Group Condition mRNA_2575 mRNA_2576 mRNA_2577 mRNA_2578 mRNA_2579
10943
10944
10945
10946
10947
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 0.1 -1.5 0.9 -1.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 0.0 0.4 -0.3 -1.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 0.4 -1.6 1.0 -1.2
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.0 -0.1 0.0 -0.9
facs on lipid accumulation Sorted No BODIPY Gate -0.7 -0.0 0.5 0.0 -0.8
auxotrophy Dropout Complete 0.1 -0.2 0.4 -0.0 -1.1
growth on oleic acid YNB Oleic Acid 0.0 -0.2 -0.2 0.5 -0.9
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 -0.3 0.8 -0.2 -0.5
growth on ricinoleic acid YNB Glucose 0.2 0.2 -0.4 0.7 -1.2
growth on oleic acid YNB Glucose 0.1 -0.3 0.4 0.3 -0.9
auxotrophy YNB Glucose -0.1 0.3 0.3 0.4 -1.3
auxotrophy YNB Glucose 75mM Methionine -0.0 0.1 0.4 0.4 -1.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.3 0.3 0.0 0.0
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 -0.5 0.6 -0.6 0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.1 1.1 0.2 -0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.1 0.2 0.1 0.4 -0.1
ypd buoyancy 40 hrs High Buoyancy 0.1 0.1 -0.0 0.1 0.1
ypd buoyancy 40 hrs Median Buoyancy 0.2 0.1 -0.0 0.1 0.1
ypd buoyancy 40 hrs Low Buoyancy 0.2 0.2 0.3 0.3 -0.3
growth on ypd YPD -0.2 0.0 0.7 0.3 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.2 0.1 0.3 0.6
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