Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2574: 10942 - K10158 B3GAT3 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3, at 477863 to 478879 10942 mRNA_2575: 10943 - KOG1022 Acetylglucosaminyltransferase EXT2/exostosin 2, at 479011 to 480812 10943 mRNA_2576: 10944 - Hypothetical Protein, at 480885 to 482213 10944 mRNA_2577: 10945 - HMMPfam-Protein of unknown function (DUF3767)-PF12597, at 482367 to 483175 10945 mRNA_2578: 10946 - KOG3574 Acetyl-CoA transporter, at 483636 to 486060 10946
Group Condition mRNA_2574 mRNA_2575 mRNA_2576 mRNA_2577 mRNA_2578
10942
10943
10944
10945
10946
ypd buoyancy 40 hrs No Buoyancy Separation -1.1 0.2 -0.5 0.6 -0.6
facs on lipid accumulation Sorted Low BODIPY Gate -1.2 -0.3 0.0 0.4 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.9 -0.7 -0.0 0.5 0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.2 -0.3 0.3 0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 -0.4 -0.3 0.8 -0.2
auxotrophy Dropout Complete -0.5 0.1 -0.2 0.4 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 -0.0 0.1 -1.5 0.9
auxotrophy YNB Glucose 75mM Arginine 0.1 -0.2 -0.0 -0.1 0.0
growth on oleic acid YNB Oleic Acid -0.3 0.0 -0.2 -0.2 0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.2 -0.2 0.1 0.3
ypd buoyancy 40 hrs High Buoyancy -0.0 0.1 0.1 -0.0 0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.4 0.2 0.4 -1.6 1.0
growth on ypd YPD -0.2 -0.2 0.0 0.7 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.4 -0.1 1.1 0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.1 -0.1 0.2 0.1 0.4
growth on oleic acid YNB Glucose 0.2 0.1 -0.3 0.4 0.3
ypd buoyancy 40 hrs Median Buoyancy 0.2 0.2 0.1 -0.0 0.1
growth on ricinoleic acid YNB Glucose 0.1 0.2 0.2 -0.4 0.7
auxotrophy YNB Glucose -0.1 -0.1 0.3 0.3 0.4
auxotrophy YNB Glucose 75mM Methionine 0.0 -0.0 0.1 0.4 0.4
ypd buoyancy 40 hrs Low Buoyancy 0.4 0.2 0.2 0.3 0.3
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