Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2569: 10937 - K07250 gabT 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase, at 466083 to 468142 10937 mRNA_2570: 10938 - SUPERFAMILY--SSF52266, at 468329 to 470280 10938 mRNA_2571: 10939 - HMMPfam-Methyltransferase domain-PF13679, at 470466 to 472507 10939 mRNA_2572: 10940 - K13093 HTATSF1 HIV Tat-specific factor 1, at 472476 to 474035 10940 mRNA_2573: 10941 - K03848 ALG6 alpha-1,3-glucosyltransferase, at 474232 to 477732 10941
Group Condition mRNA_2569 mRNA_2570 mRNA_2571 mRNA_2572 mRNA_2573
10937
10938
10939
10940
10941
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.5 0.0   -0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.7 0.4 -1.7   -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.8 0.3 0.1   -0.2
growth on oleic acid YNB Glucose -0.4 -0.1 -0.1   0.0
growth on oleic acid YNB Oleic Acid -0.3 -0.2 -0.1   -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.6 -0.1 0.3   0.0
auxotrophy Dropout Complete -0.5 0.1 0.1   -0.1
ypd buoyancy 40 hrs Low Buoyancy 0.2 0.0 -0.2   -0.2
growth on ricinoleic acid YNB Ricinoleic Acid 0.3 -0.3 0.1   -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.1 0.2   -0.0
auxotrophy YNB Glucose 75mM Methionine 0.0 0.1 -0.1   -0.1
growth on ypd YPD -0.3 0.1 0.4   -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 -0.2 0.1   0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 0.2 -0.1   0.1
auxotrophy YNB Glucose -0.2 0.4 0.0   -0.0
auxotrophy YNB Glucose 75mM Arginine 0.1 0.2 -0.0   -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 0.2 0.1   -0.1
ypd buoyancy 40 hrs High Buoyancy 0.3 0.2 -0.0   -0.1
growth on ricinoleic acid YNB Glucose 0.3 -0.1 0.3   -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 0.3 -0.0   0.1
ypd buoyancy 40 hrs Median Buoyancy 0.4 0.1 0.3   -0.1
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