Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2565: 10933 - K00799 GST, gst glutathione S-transferase, at 457320 to 458239 10933 mRNA_2566: 10934 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 458931 to 461054 10934 mRNA_2567: 10935 - BLAST proteophosphoglycan 5 [Moniliophthora roreri MCA ..., at 461158 to 463055 10935 mRNA_2568: 10936 - KOG2504 Monocarboxylate transporter, at 463556 to 465484 10936 mRNA_2569: 10937 - K07250 gabT 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase, at 466083 to 468142 10937
Group Condition mRNA_2565 mRNA_2566 mRNA_2567 mRNA_2568 mRNA_2569
10933
10934
10935
10936
10937
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -1.2 -1.0 -0.2 0.7
growth on oleic acid YNB Glucose -0.2 0.2 0.0 -0.3 -0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.1 -0.1 0.1 -0.6
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 0.2 0.2 0.2 -0.8
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 0.3 0.1 -0.5 0.1
growth on ypd YPD -0.6 0.1 0.0 0.3 -0.3
auxotrophy Dropout Complete 0.1 0.2 0.3 -0.5 -0.5
auxotrophy YNB Glucose 75mM Arginine -0.3 0.0 0.1 -0.1 0.1
growth on oleic acid YNB Oleic Acid -0.0 -0.0 0.5 -0.2 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.3 0.4 0.1 -0.0 -0.2
auxotrophy YNB Glucose -0.0 0.1 0.3 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.0 -0.0 0.3 -0.2 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 0.2 0.2 0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.3 0.2 0.1 0.1 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.1 0.3 0.2 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 0.6 0.5 -0.2 -0.2
auxotrophy YNB Glucose 75mM Methionine 0.1 0.1 0.2 -0.0 0.0
ypd buoyancy 40 hrs Median Buoyancy -0.2 0.3 0.0 0.1 0.4
growth on ricinoleic acid YNB Glucose -0.4 0.9 0.3 -0.5 0.3
ypd buoyancy 40 hrs High Buoyancy -0.2 0.3 -0.0 0.3 0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 1.3 0.8 0.0 0.3
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