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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_2555: 10923 - K12736 PPWD1 peptidylprolyl isomerase domain and WD repeat-containing protein 1, at 432774 to 435316
10923
mRNA_2556: 10924 - Hypothetical Protein, at 435593 to 437275
10924
mRNA_2557: 10925 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 437565 to 439347
10925
mRNA_2558: 10926 - KOG3183 Predicted Zn-finger protein, at 439511 to 440693
10926
mRNA_2559: 10927 - HMMPfam-Translin family-PF01997,SUPERFAMILY--SSF74784, at 441201 to 442474
10927
Group
Condition
mRNA_2555
mRNA_2556
mRNA_2557
mRNA_2558
mRNA_2559
10923
10924
10925
10926
10927
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-0.2
-0.7
-0.6
facs on lipid accumulation
Sorted Low BODIPY Gate
0.4
0.0
-0.5
-0.1
growth on oleic acid
YNB Oleic Acid
-0.0
0.0
-0.4
0.3
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
0.1
-0.1
-0.0
ypd buoyancy
40 hrs High Buoyancy
0.0
0.1
-0.1
0.1
ypd buoyancy
40 hrs Median Buoyancy
0.1
0.2
-0.1
0.0
facs on lipid accumulation
Sorted High BODIPY Gate
0.4
-0.1
-0.1
0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.4
-0.1
0.1
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.3
0.5
-0.2
-0.2
auxotrophy
YNB Glucose
-0.2
-0.1
0.2
0.5
auxotrophy
YNB Glucose 75mM Arginine
-0.1
0.2
0.1
0.2
growth on ricinoleic acid
YNB Glucose
0.2
-0.0
0.2
0.1
growth on ypd
YPD
0.4
-0.3
0.4
0.1
ypd buoyancy
40 hrs Low Buoyancy
0.0
0.2
-0.1
0.3
auxotrophy
Dropout Complete
0.0
-0.1
0.1
0.5
growth on oleic acid
YNB Glucose
-0.0
0.1
0.2
0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.3
0.5
-0.1
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.3
0.2
0.1
0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
0.3
0.1
-0.0
0.6
auxotrophy
YNB Glucose 75mM Methionine
-0.1
0.1
0.5
0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.2
-0.0
0.4
0.4
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