Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2548: 10916 - KOG1943 Beta-tubulin folding cofactor D, at 419199 to 423600 10916 mRNA_2549: 10917 - HMMPfam-Chromatin modification-related protein EAF7-PF07904, at 423711 to 424964 10917 mRNA_2550: 10918 - KOG3116 Predicted C3H1-type Zn-finger protein, at 425175 to 426192 10918 mRNA_2551: 10919 - K00799 GST, gst glutathione S-transferase, at 426245 to 427122 10919 mRNA_2552: 10920 - Hypothetical Protein, at 428082 to 428710 10920
Group Condition mRNA_2548 mRNA_2549 mRNA_2550 mRNA_2551 mRNA_2552
10916
10917
10918
10919
10920
facs on lipid accumulation Sorted High BODIPY Gate -0.8 -0.9 -0.3 -1.2 0.4
auxotrophy Dropout Complete -0.1 -0.8 -0.4 -1.2 -0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.2 -1.4 -0.4 -1.1 0.1
ypd buoyancy 40 hrs No Buoyancy Separation 1.6 0.1 -2.3 -1.6 -0.4
ypd buoyancy 40 hrs Median Buoyancy 0.1 -0.0 -0.1 -1.4 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.4 -0.5 -0.0 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.2 0.7 -0.4 -0.8 0.7
ypd buoyancy 40 hrs Low Buoyancy 0.5 -0.2 0.1 -1.1 -0.2
auxotrophy YNB Glucose 0.2 -0.7 -0.1 0.2 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.1 0.0 -0.0 -0.3
ypd buoyancy 40 hrs High Buoyancy 0.8 -0.2 -0.3 -0.8 0.0
growth on ricinoleic acid YNB Glucose 0.2 0.5 -0.2 -0.2 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.8 2.2 -1.0 -0.7 0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 0.7 -0.2 -0.3 0.3
growth on oleic acid YNB Oleic Acid 0.5 -0.4 -0.5 0.3 0.4
growth on oleic acid YNB Glucose -0.4 -0.0 0.0 0.6 0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.7 0.4 -0.0 -0.4 0.0
growth on ypd YPD -0.8 1.0 -0.0 0.4 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.6 1.2 -0.1 -0.2 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 0.6 0.2 1.2 0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.6 1.0 0.0 1.1 0.6
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