Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2530: 10898 - K14634 TIGAR fructose-2,6-bisphosphatase, at 368950 to 370646 10898 mRNA_2531: 10899 - KOG2816 Predicted transporter ADD1 (major facilitator superfamily), at 372269 to 375397 10899 mRNA_2532: 10900 - KOG2961 Predicted hydrolase (HAD superfamily), at 375571 to 377208 10900 mRNA_2533: 10901 - K10706 SETX, ALS4 senataxin, at 377456 to 384141 10901 mRNA_2534: 10902 - HMMPfam-Nucleotide-diphospho-sugar transferase-PF03407, at 384523 to 387549 10902
Group Condition mRNA_2530 mRNA_2531 mRNA_2532 mRNA_2533 mRNA_2534
10898
10899
10900
10901
10902
auxotrophy Dropout Complete -0.4 -0.2 -0.6 -0.1 -0.4
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.1 -1.1 -0.2 0.2
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.3 -0.2 -0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.4 -0.3 0.0 -0.2 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 -0.3 -0.2 -0.3 -0.1
growth on oleic acid YNB Oleic Acid -0.3 -0.2 -0.4 0.1 0.2
growth on oleic acid YNB Glucose 0.0 -0.2 -0.3 -0.2 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 0.6 -0.5 -0.4 -0.1
growth on ricinoleic acid YNB Glucose -0.0 0.1 -0.2 -0.3 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation 0.4 0.4 -1.3 0.0 0.0
ypd buoyancy 40 hrs Low Buoyancy -0.1 0.2 -0.5 0.0 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3 -0.4 -0.4 -0.0 0.1
auxotrophy YNB Glucose -0.2 -0.0 0.2 -0.4 0.0
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 0.1 0.0 -0.5 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 0.1 -0.8 0.4 0.3
ypd buoyancy 40 hrs Median Buoyancy -0.0 0.2 -0.1 0.1 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 0.6 0.0 -0.1 0.0
ypd buoyancy 40 hrs High Buoyancy 0.0 -0.1 0.3 0.0 0.0
facs on lipid accumulation Sorted High BODIPY Gate 0.1 -0.0 0.1 0.1 0.2
growth on ypd YPD 0.0 0.9 -0.2 0.0 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.4 0.2 -0.2 0.4 0.3
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