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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_2528: 10896 - HMMPfam-Fungal chitosanase of glycosyl hydrolase group 75-PF07335, at 365082 to 366780
10896
mRNA_2529: 10897 - K01613 psd, PISD phosphatidylserine decarboxylase, at 366940 to 368677
10897
mRNA_2530: 10898 - K14634 TIGAR fructose-2,6-bisphosphatase, at 368950 to 370646
10898
mRNA_2531: 10899 - KOG2816 Predicted transporter ADD1 (major facilitator superfamily), at 372269 to 375397
10899
mRNA_2532: 10900 - KOG2961 Predicted hydrolase (HAD superfamily), at 375571 to 377208
10900
Group
Condition
mRNA_2528
mRNA_2529
mRNA_2530
mRNA_2531
mRNA_2532
10896
10897
10898
10899
10900
auxotrophy
Dropout Complete
0.1
-0.5
-0.4
-0.2
-0.6
auxotrophy
YNB Glucose 75mM Methionine
0.1
-0.1
-0.2
-0.1
-1.1
growth on oleic acid
YNB Oleic Acid
0.0
-0.3
-0.3
-0.2
-0.4
ypd buoyancy
40 hrs Low Buoyancy
0.1
-0.5
-0.1
0.2
-0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.4
-0.2
0.6
-0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
0.2
0.1
0.1
-0.8
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
0.1
0.3
-0.4
-0.4
auxotrophy
YNB Glucose 75mM Arginine
0.5
-0.1
-0.3
-0.3
-0.2
growth on oleic acid
YNB Glucose
0.5
-0.4
0.0
-0.2
-0.3
growth on ricinoleic acid
YNB Glucose
0.1
-0.4
-0.0
0.1
-0.2
ypd buoyancy
40 hrs Median Buoyancy
0.0
-0.2
-0.0
0.2
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.3
0.0
0.0
-0.1
0.3
growth on ypd
YPD
-0.5
-0.2
0.0
0.9
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
0.8
-0.1
-0.4
-0.3
0.0
ypd buoyancy
40 hrs No Buoyancy Separation
0.3
0.3
0.4
0.4
-1.3
growth on ricinoleic acid
YNB Ricinoleic Acid
0.4
-0.5
-0.3
0.6
0.0
auxotrophy
YNB Glucose
0.5
0.1
-0.2
-0.0
0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.6
0.3
0.4
0.2
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
0.8
0.2
0.1
0.1
0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
1.1
0.5
0.2
-0.3
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
0.9
0.5
0.1
-0.0
0.1
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