Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2528: 10896 - HMMPfam-Fungal chitosanase of glycosyl hydrolase group 75-PF07335, at 365082 to 366780 10896 mRNA_2529: 10897 - K01613 psd, PISD phosphatidylserine decarboxylase, at 366940 to 368677 10897 mRNA_2530: 10898 - K14634 TIGAR fructose-2,6-bisphosphatase, at 368950 to 370646 10898 mRNA_2531: 10899 - KOG2816 Predicted transporter ADD1 (major facilitator superfamily), at 372269 to 375397 10899 mRNA_2532: 10900 - KOG2961 Predicted hydrolase (HAD superfamily), at 375571 to 377208 10900
Group Condition mRNA_2528 mRNA_2529 mRNA_2530 mRNA_2531 mRNA_2532
10896
10897
10898
10899
10900
auxotrophy Dropout Complete 0.1 -0.5 -0.4 -0.2 -0.6
auxotrophy YNB Glucose 75mM Methionine 0.1 -0.1 -0.2 -0.1 -1.1
growth on oleic acid YNB Oleic Acid 0.0 -0.3 -0.3 -0.2 -0.4
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.5 -0.1 0.2 -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.4 -0.2 0.6 -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 0.2 0.1 0.1 -0.8
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 0.1 0.3 -0.4 -0.4
auxotrophy YNB Glucose 75mM Arginine 0.5 -0.1 -0.3 -0.3 -0.2
growth on oleic acid YNB Glucose 0.5 -0.4 0.0 -0.2 -0.3
growth on ricinoleic acid YNB Glucose 0.1 -0.4 -0.0 0.1 -0.2
ypd buoyancy 40 hrs Median Buoyancy 0.0 -0.2 -0.0 0.2 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.3 0.0 0.0 -0.1 0.3
growth on ypd YPD -0.5 -0.2 0.0 0.9 -0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.8 -0.1 -0.4 -0.3 0.0
ypd buoyancy 40 hrs No Buoyancy Separation 0.3 0.3 0.4 0.4 -1.3
growth on ricinoleic acid YNB Ricinoleic Acid 0.4 -0.5 -0.3 0.6 0.0
auxotrophy YNB Glucose 0.5 0.1 -0.2 -0.0 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.6 0.3 0.4 0.2 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.8 0.2 0.1 0.1 0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy 1.1 0.5 0.2 -0.3 -0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.9 0.5 0.1 -0.0 0.1
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