Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2525: 10893 - KOG0590 Checkpoint kinase and related serine/threonine protein kinases, at 354865 to 358254 10893 mRNA_2526: 10894 - HMMPfam-Protein of unknown function (DUF1212)-PF06738,HMMPfam-Protein of unknown function (DUF3815)-PF12821, at 358856 to 360952 10894 mRNA_2527: 10895 - BLAST protein DGCR14-like [Mucor ambiguus], at 363824 to 364696 10895 mRNA_2528: 10896 - HMMPfam-Fungal chitosanase of glycosyl hydrolase group 75-PF07335, at 365082 to 366780 10896 mRNA_2529: 10897 - K01613 psd, PISD phosphatidylserine decarboxylase, at 366940 to 368677 10897
Group Condition mRNA_2525 mRNA_2526 mRNA_2527 mRNA_2528 mRNA_2529
10893
10894
10895
10896
10897
growth on ypd YPD -0.1 0.0 0.4 -0.5 -0.2
auxotrophy Dropout Complete -0.1 0.0 0.1 0.1 -0.5
growth on ricinoleic acid YNB Ricinoleic Acid 0.0 0.3 -0.4 0.4 -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 0.1 0.0 -0.1 0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3 0.1 -0.5 -0.0 0.1
ypd buoyancy 40 hrs High Buoyancy 0.1 0.0 0.2 -0.3 0.0
growth on ricinoleic acid YNB Glucose -0.1 0.2 0.4 0.1 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0 0.4 0.4 -0.2 -0.4
growth on oleic acid YNB Glucose -0.0 0.1 0.1 0.5 -0.4
ypd buoyancy 40 hrs Median Buoyancy 0.1 -0.2 0.7 0.0 -0.2
growth on oleic acid YNB Oleic Acid 0.0 0.3 0.5 0.0 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.2 0.2 0.5 0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.0 -0.9 1.1 0.5
ypd buoyancy 40 hrs Low Buoyancy 0.2 -0.2 1.0 0.1 -0.5
ypd buoyancy 40 hrs No Buoyancy Separation 0.3 -0.3 0.1 0.3 0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.0 0.1 0.1 0.8 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.0 0.2 0.4 0.5 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.3 -0.2 0.6 0.3
facs on lipid accumulation Sorted High BODIPY Gate 0.2 -0.0 -0.3 0.9 0.5
auxotrophy YNB Glucose 0.0 0.1 0.9 0.5 0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.2 0.3 0.9 0.8 0.2
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