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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_2520: 10888 - KOG1441 Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter, at 345046 to 346549
10888
mRNA_2521: 10889 - BLAST beta-glucosidase 1 precursor [Aspergillus rambellii], at 346896 to 348680
10889
mRNA_2522: 10890 - BLAST GPI ethanolamine phosphate transferase 2 [Talaromyces..., at 348835 to 350135
10890
mRNA_2523: 10891 - Hypothetical Protein, at 351016 to 351939
10891
mRNA_2524: 10892 - BLAST Immunoglobulin-like domain contaning protein [Rho..., at 352373 to 353826
10892
Group
Condition
mRNA_2520
mRNA_2521
mRNA_2522
mRNA_2523
mRNA_2524
10888
10889
10890
10891
10892
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-2.1
0.5
-0.2
0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-1.6
0.1
0.0
-0.1
growth on ypd
YPD
-0.2
-0.4
-0.2
-0.3
-0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.8
0.2
0.1
0.1
ypd buoyancy
40 hrs High Buoyancy
-0.3
-0.3
0.1
-0.3
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
-0.3
-0.0
0.0
-0.0
growth on oleic acid
YNB Oleic Acid
0.5
-0.8
-0.3
0.7
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
0.0
-0.3
-0.0
-0.1
0.4
growth on oleic acid
YNB Glucose
0.4
0.5
-0.3
0.4
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.4
0.5
-0.2
0.5
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
1.0
0.9
0.0
-0.6
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
1.4
-0.2
-0.2
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.5
1.2
0.2
0.2
0.0
auxotrophy
YNB Glucose
0.4
0.3
0.1
0.2
0.1
auxotrophy
Dropout Complete
0.4
0.6
-0.0
0.3
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
0.2
1.8
-0.2
-0.1
-0.4
growth on ricinoleic acid
YNB Glucose
0.4
0.8
-0.2
-0.4
0.7
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.7
0.6
-0.1
-0.4
0.6
auxotrophy
YNB Glucose 75mM Arginine
0.3
0.3
0.1
0.6
0.2
auxotrophy
YNB Glucose 75mM Methionine
0.5
0.5
-0.0
0.4
0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.5
0.4
0.2
0.5
0.2
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