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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_2518: 10886 - K03189 ureG urease accessory protein, at 340022 to 341494
10886
mRNA_2519: 10887 - SMART-Parallel beta-helix repeats-SM00710,SUPERFAMILY--SSF51126, at 342708 to 344522
10887
mRNA_2520: 10888 - KOG1441 Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter, at 345046 to 346549
10888
mRNA_2521: 10889 - BLAST beta-glucosidase 1 precursor [Aspergillus rambellii], at 346896 to 348680
10889
mRNA_2522: 10890 - BLAST GPI ethanolamine phosphate transferase 2 [Talaromyces..., at 348835 to 350135
10890
Group
Condition
mRNA_2518
mRNA_2519
mRNA_2520
mRNA_2521
mRNA_2522
10886
10887
10888
10889
10890
ypd buoyancy
40 hrs Low Buoyancy
-0.0
0.1
-0.1
-1.6
0.1
ypd buoyancy
40 hrs Median Buoyancy
0.1
-0.2
-0.2
-0.8
0.2
ypd buoyancy
40 hrs No Buoyancy Separation
0.3
0.5
-0.1
-2.1
0.5
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-0.2
0.0
-0.3
-0.0
ypd buoyancy
40 hrs High Buoyancy
0.2
-0.3
-0.3
-0.3
0.1
growth on oleic acid
YNB Oleic Acid
0.1
-0.1
0.5
-0.8
-0.3
growth on ypd
YPD
0.4
0.2
-0.2
-0.4
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.5
-0.2
-0.0
-0.3
-0.0
growth on oleic acid
YNB Glucose
-0.2
0.1
0.4
0.5
-0.3
auxotrophy
YNB Glucose 75mM Arginine
0.0
-0.0
0.3
0.3
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.2
-0.1
0.4
0.5
-0.2
auxotrophy
YNB Glucose
0.3
-0.2
0.4
0.3
0.1
auxotrophy
Dropout Complete
0.1
-0.1
0.4
0.6
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
0.1
-0.5
1.2
0.2
growth on ricinoleic acid
YNB Glucose
-0.1
0.2
0.4
0.8
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
0.2
0.7
0.6
-0.1
auxotrophy
YNB Glucose 75mM Methionine
0.3
0.1
0.5
0.5
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.5
-0.2
0.5
0.4
0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
0.2
0.1
0.1
1.4
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
0.3
0.2
1.8
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
0.4
1.0
0.9
0.0
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