Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2515: 10883 - KOG0035 Ca2+-binding actin-bundling protein (actinin), alpha chain (EF-Hand protein superfamily), at 330969 to 334313 10883 mRNA_2516: 10884 - KOG0627 Heat shock transcription factor, at 334568 to 336151 10884 mRNA_2517: 10885 - K01078 E3.1.3.2 acid phosphatase, at 337169 to 339877 10885 mRNA_2518: 10886 - K03189 ureG urease accessory protein, at 340022 to 341494 10886 mRNA_2519: 10887 - SMART-Parallel beta-helix repeats-SM00710,SUPERFAMILY--SSF51126, at 342708 to 344522 10887
Group Condition mRNA_2515 mRNA_2516 mRNA_2517 mRNA_2518 mRNA_2519
10883
10884
10885
10886
10887
facs on lipid accumulation Sorted High BODIPY Gate -1.1 -0.9 -0.1 -0.1 0.3
growth on oleic acid YNB Glucose -0.7 -0.2 -0.1 -0.2 0.1
facs on lipid accumulation Sorted Low BODIPY Gate -1.0 -0.5 0.2 0.2 0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.6 -0.3 0.3 -0.2 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 -0.7 0.2 -0.3 0.2
auxotrophy Dropout Complete -0.5 -0.3 -0.0 0.1 -0.1
auxotrophy YNB Glucose -0.7 -0.2 -0.0 0.3 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.2 -0.3 0.0 -0.0
growth on oleic acid YNB Oleic Acid -0.1 -0.6 -0.0 0.1 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.1 0.2 -0.3 0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 0.2 0.2 0.2 -0.1
auxotrophy YNB Glucose 75mM Methionine 0.2 -0.3 -0.0 0.3 0.1
growth on ricinoleic acid YNB Glucose 0.3 -0.1 0.2 -0.1 0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 0.1 0.5 0.5 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 0.1 0.2 0.1 0.1
ypd buoyancy 40 hrs Median Buoyancy 0.5 0.6 0.0 0.1 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 0.2 0.3 0.5 -0.2
ypd buoyancy 40 hrs Low Buoyancy 0.5 0.3 0.1 -0.0 0.1
ypd buoyancy 40 hrs High Buoyancy 0.6 0.4 0.1 0.2 -0.3
growth on ypd YPD 1.3 0.1 -0.0 0.4 0.2
ypd buoyancy 40 hrs No Buoyancy Separation 1.5 0.6 0.1 0.3 0.5
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