Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2507: 10875 - K11232 YPD1 osomolarity two-component system, phosphorelay intermediate protein YPD1, at 314960 to 315808 10875 mRNA_2508: 10876 - BLAST proteophosphoglycan ppg4 [Lichtheimia corymbifera JMR..., at 316713 to 320410 10876 mRNA_2509: 10877 - HMMPfam-PI31 proteasome regulator-PF08577,HMMPfam-PI31 proteasome regulator N-terminal-PF11566, at 320843 to 322229 10877 mRNA_2510: 10878 - K09272 SSRP1 structure-specific recognition protein 1, at 322447 to 324875 10878 mRNA_2511: 10879 - Hypothetical Protein, at 325474 to 325902 10879
Group Condition mRNA_2507 mRNA_2508 mRNA_2509 mRNA_2510 mRNA_2511
10875
10876
10877
10878
10879
ypd buoyancy 40 hrs No Buoyancy Separation   -0.5 -0.1   -2.0
ypd buoyancy 40 hrs Median Buoyancy   -0.1 -0.0   -1.3
ypd buoyancy 40 hrs Low Buoyancy   0.2 -0.6   -1.0
facs on lipid accumulation Sorted No BODIPY Gate   0.1 0.4   -1.5
ypd buoyancy 40 hrs High Buoyancy   0.0 -0.1   -0.6
facs on lipid accumulation Sorted Low BODIPY Gate   -0.1 0.1   -0.6
growth on oleic acid YNB Oleic Acid   0.1 0.1   -0.8
growth on ricinoleic acid YNB Methylricinoleic Acid   0.1 -0.2   -0.4
facs on lipid accumulation Sorted High BODIPY Gate   0.1 0.9   -1.3
auxotrophy YNB Glucose 75mM Methionine   0.1 0.4   -0.6
auxotrophy YNB Glucose   -0.2 0.3   -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.1 -0.8   0.7
growth on oleic acid YNB Glucose   0.2 -0.4   0.4
growth on ricinoleic acid YNB Glucose   -0.1 0.2   0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.0 0.6   -0.2
auxotrophy YNB Glucose 75mM Arginine   -0.2 0.4   0.3
growth on ypd YPD   -0.1 0.3   0.5
growth on ricinoleic acid YNB Ricinoleic Acid   -0.1 0.3   0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.1 1.0   0.0
auxotrophy Dropout Complete   -0.0 -0.1   1.1
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.3 0.8   0.4
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