Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2497: 10865 - KOG0379 Kelch repeat-containing proteins, at 291079 to 294153 10865 mRNA_2498: 10866 - HMMPfam-Polyketide cyclase / dehydrase and lipid transport-PF10604,SUPERFAMILY--SSF55961, at 295224 to 296091 10866 mRNA_2499: 10867 - BLAST secreted protein [Moniliophthora roreri MCA 2997], at 297402 to 298448 10867 mRNA_2500: 10868 - Hypothetical Protein, at 299018 to 301561 10868 mRNA_2501: 10869 - K00852 rbsK, RBKS ribokinase, at 301795 to 303224 10869
Group Condition mRNA_2497 mRNA_2498 mRNA_2499 mRNA_2500 mRNA_2501
10865
10866
10867
10868
10869
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 -0.7 -2.0 -0.1 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.1 0.6 -2.3 -0.7
growth on ricinoleic acid YNB Glucose -0.0 -0.8 -1.4 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.6 -0.4 -0.7 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 -0.2 -1.8 -0.1 0.1
auxotrophy YNB Glucose 75mM Arginine 0.2 -0.7 -1.0 0.4 -0.1
growth on oleic acid YNB Oleic Acid 0.1 -0.7 -0.6 0.1 0.1
growth on oleic acid YNB Glucose 0.1 -0.7 -0.6 0.1 -0.0
auxotrophy YNB Glucose 0.0 -0.1 -0.9 -0.0 0.0
auxotrophy Dropout Complete -0.1 -0.3 -1.1 0.3 0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.3 -0.1 0.1 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.1 -1.1 0.2 0.5
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.3 -0.6 0.2 -0.5
facs on lipid accumulation Sorted High BODIPY Gate 0.0 0.1 0.2 -0.1 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 -0.1 0.0 -0.2 0.0
ypd buoyancy 40 hrs Low Buoyancy 0.2 0.2 -0.5 0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.2 -0.2 0.5 -0.3 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 -0.3 0.7 -0.4 -0.2
growth on ypd YPD 0.4 -0.1 -0.4 -0.0 0.2
ypd buoyancy 40 hrs High Buoyancy -0.1 0.2 -0.2 0.5 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 0.1 0.7 -0.3 0.1
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