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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_2493: 10861 - KOG3098 Uncharacterized conserved protein, at 279372 to 281338
10861
mRNA_2494: 10862 - HMMPfam-Taurine catabolism dioxygenase TauD, TfdA family-PF02668,SUPERFAMILY--SSF51197, at 281884 to 283232
10862
mRNA_2495: 10863 - K03507 DPB11 DNA replication regulator DPB11, at 283554 to 287606
10863
mRNA_2496: 10864 - KOG0254 Predicted transporter (major facilitator superfamily), at 288113 to 290739
10864
mRNA_2497: 10865 - KOG0379 Kelch repeat-containing proteins, at 291079 to 294153
10865
Group
Condition
mRNA_2493
mRNA_2494
mRNA_2495
mRNA_2496
mRNA_2497
10861
10862
10863
10864
10865
auxotrophy
Dropout Complete
0.1
-0.2
-1.0
-0.1
-0.1
growth on ricinoleic acid
YNB Glucose
-0.1
-0.2
-0.4
-0.2
-0.0
auxotrophy
YNB Glucose 75mM Arginine
0.2
0.1
-1.2
-0.1
0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
0.0
-0.4
-0.2
0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
0.0
-0.1
-0.3
0.2
auxotrophy
YNB Glucose
0.0
-0.1
-0.4
0.1
0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.1
-0.1
-0.0
0.1
auxotrophy
YNB Glucose 75mM Methionine
0.3
-0.1
-0.5
0.3
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
0.3
-0.3
0.6
-0.3
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.0
-0.4
0.5
0.1
-0.1
growth on oleic acid
YNB Oleic Acid
-0.2
-0.0
0.3
0.1
0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.2
-0.3
0.0
0.3
0.0
ypd buoyancy
40 hrs High Buoyancy
-0.0
0.2
0.4
-0.1
-0.1
growth on ypd
YPD
0.1
0.0
-0.4
0.2
0.4
growth on oleic acid
YNB Glucose
-0.3
0.1
0.5
0.1
0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
0.1
0.3
-0.0
0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.1
-0.0
0.5
-0.1
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
0.3
-0.3
0.4
0.1
0.2
facs on lipid accumulation
Sorted No BODIPY Gate
0.4
0.1
-0.2
0.3
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
-0.1
0.6
0.3
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
-0.4
1.2
0.1
0.1
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