Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2476: 10844 - KOG0673 Thymidylate synthase, at 240298 to 241620 10844 mRNA_2477: 10845 - K00560 thyA, TYMS thymidylate synthase, at 242038 to 243139 10845 mRNA_2478: 10846 - K20293 COG6, COD2 conserved oligomeric Golgi complex subunit 6, at 243520 to 246165 10846 mRNA_2479: 10847 - Hypothetical Protein, at 246856 to 249133 10847 mRNA_2480: 10848 - KOG0907 Thioredoxin, at 249211 to 249707 10848
Group Condition mRNA_2476 mRNA_2477 mRNA_2478 mRNA_2479 mRNA_2480
10844
10845
10846
10847
10848
facs on lipid accumulation Sorted Low BODIPY Gate -0.5   -0.1 -0.2 0.1
ypd buoyancy 40 hrs High Buoyancy -0.2   -0.3 -0.1 0.1
ypd buoyancy 40 hrs No Buoyancy Separation -1.0   -0.2 0.6 0.2
growth on oleic acid YNB Glucose -0.2   0.2 -0.0 -0.4
growth on ypd YPD -0.1   -0.5 0.1 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5   0.9 0.1 -0.6
growth on oleic acid YNB Oleic Acid 0.2   0.4 -0.1 -0.7
auxotrophy Dropout Complete -0.2   0.2 0.2 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.1   0.3 -0.1 -0.0
ypd buoyancy 40 hrs Median Buoyancy 0.1   -0.1 -0.1 0.2
growth on ricinoleic acid YNB Glucose 0.1   0.4 0.0 -0.4
auxotrophy YNB Glucose 75mM Arginine -0.2   0.2 0.3 0.1
auxotrophy YNB Glucose -0.1   0.3 0.2 0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.3   1.3 -0.2 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.1   0.1 0.2 0.3
facs on lipid accumulation Sorted No BODIPY Gate 0.2   -0.3 0.2 0.6
facs on lipid accumulation Sorted High BODIPY Gate 0.5   -0.1 -0.0 0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.6   0.2 0.1 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.6   0.5 -0.1 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.7   0.7 0.1 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.6   1.0 0.1 -0.2
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