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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_2471: 10839 - K13104 ZNF830, CCDC16 zinc finger protein 830, at 227199 to 228171
10839
mRNA_2472: 10840 - K07836 RAP1B Ras-related protein Rap-1B, at 228685 to 229666
10840
mRNA_2473: 10841 - K01610 E4.1.1.49, pckA phosphoenolpyruvate carboxykinase (ATP), at 230136 to 233558
10841
mRNA_2474: 10842 - KOG0603 Ribosomal protein S6 kinase, at 234258 to 235956
10842
mRNA_2475: 10843 - BLAST CAMK protein kinase [Microbotryum lychnidis-dioicae p..., at 236278 to 238719
10843
Group
Condition
mRNA_2471
mRNA_2472
mRNA_2473
mRNA_2474
mRNA_2475
10839
10840
10841
10842
10843
growth on oleic acid
YNB Oleic Acid
-0.0
-0.8
-0.5
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.8
-0.3
-0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-1.0
-0.1
-0.4
growth on oleic acid
YNB Glucose
-0.3
-0.2
-0.3
-0.2
growth on ricinoleic acid
YNB Glucose
-0.2
-0.0
-0.1
-0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.7
-0.1
0.0
-0.0
auxotrophy
Dropout Complete
-0.2
-0.3
-0.1
-0.1
growth on ypd
YPD
-0.0
-0.3
-0.2
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
-0.2
0.0
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.5
-0.3
0.5
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
0.1
0.1
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
-0.6
0.0
-0.2
0.4
auxotrophy
YNB Glucose 75mM Arginine
0.2
-0.1
-0.3
0.3
ypd buoyancy
40 hrs High Buoyancy
-0.3
0.1
0.2
0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
0.0
0.0
0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
0.1
0.5
-0.1
ypd buoyancy
40 hrs Low Buoyancy
0.0
-0.1
-0.1
0.4
auxotrophy
YNB Glucose 75mM Methionine
0.2
-0.1
-0.4
0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
0.2
0.2
-0.2
auxotrophy
YNB Glucose
0.2
-0.1
0.1
0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
0.2
0.2
0.4
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