Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2453: 10821 - HMMPfam-Fungal cellulose binding domain-PF00734,ProSitePatterns-CBM1 (carbohydrate binding type-1) domain signature.-PS00562,ProSiteProfiles-CBM1 (carbohydrate binding type-1) domain profile.-PS51164,SMART-Fungal-type cellulose-binding domain-SM00236,SUPERFAMILY--SSF57180, at 166755 to 168701 10821 mRNA_2454: 10822 - K12823 DDX5, DBP2 ATP-dependent RNA helicase DDX5/DBP2, at 169687 to 172594 10822 mRNA_2455: 10823 - K16912 LAS1 ribosomal biogenesis protein LAS1, at 172733 to 174671 10823 mRNA_2456: 10824 - Hypothetical Protein, at 174898 to 175908 10824 mRNA_2457: 10825 - K10589 UBE3C ubiquitin-protein ligase E3 C, at 177733 to 180454 10825
Group Condition mRNA_2453 mRNA_2454 mRNA_2455 mRNA_2456 mRNA_2457
10821
10822
10823
10824
10825
auxotrophy YNB Glucose 75mM Arginine -0.1       -0.7
facs on lipid accumulation Sorted Low BODIPY Gate -0.1       -0.5
growth on ricinoleic acid YNB Ricinoleic Acid -0.4       -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1       -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1       -0.3
growth on oleic acid YNB Glucose -0.1       -0.2
auxotrophy YNB Glucose 75mM Methionine 0.1       -0.3
growth on ypd YPD 0.1       -0.2
auxotrophy YNB Glucose 0.3       -0.4
ypd buoyancy 40 hrs No Buoyancy Separation -0.1       0.0
ypd buoyancy 40 hrs Low Buoyancy -0.2       0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0       0.0
facs on lipid accumulation Sorted No BODIPY Gate 0.1       -0.1
growth on ricinoleic acid YNB Glucose -0.2       0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.4       -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0       0.1
growth on oleic acid YNB Oleic Acid 0.2       -0.1
auxotrophy Dropout Complete 0.3       -0.1
ypd buoyancy 40 hrs High Buoyancy 0.1       0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1       0.4
ypd buoyancy 40 hrs Median Buoyancy -0.1       0.5
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