Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2452: 10820 - HMMPfam-Ribonuclease H2 non-catalytic subunit (Ylr154p-like)-PF08615, at 165209 to 166286 10820 mRNA_2453: 10821 - HMMPfam-Fungal cellulose binding domain-PF00734,ProSitePatterns-CBM1 (carbohydrate binding type-1) domain signature.-PS00562,ProSiteProfiles-CBM1 (carbohydrate binding type-1) domain profile.-PS51164,SMART-Fungal-type cellulose-binding domain-SM00236,SUPERFAMILY--SSF57180, at 166755 to 168701 10821 mRNA_2454: 10822 - K12823 DDX5, DBP2 ATP-dependent RNA helicase DDX5/DBP2, at 169687 to 172594 10822 mRNA_2455: 10823 - K16912 LAS1 ribosomal biogenesis protein LAS1, at 172733 to 174671 10823 mRNA_2456: 10824 - Hypothetical Protein, at 174898 to 175908 10824
Group Condition mRNA_2452 mRNA_2453 mRNA_2454 mRNA_2455 mRNA_2456
10820
10821
10822
10823
10824
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.8 -0.1      
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.4      
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.1      
facs on lipid accumulation Sorted No BODIPY Gate -0.4 0.1      
growth on ypd YPD -0.3 0.1      
facs on lipid accumulation Sorted High BODIPY Gate -0.5 0.4      
ypd buoyancy 40 hrs Low Buoyancy 0.2 -0.2      
auxotrophy Dropout Complete -0.3 0.3      
auxotrophy YNB Glucose 75mM Arginine 0.2 -0.1      
growth on oleic acid YNB Glucose 0.2 -0.1      
growth on ricinoleic acid YNB Glucose 0.3 -0.2      
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3 -0.1      
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 -0.0      
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.4 -0.0      
ypd buoyancy 40 hrs Median Buoyancy 0.5 -0.1      
ypd buoyancy 40 hrs High Buoyancy 0.3 0.1      
growth on ricinoleic acid YNB Methylricinoleic Acid 0.6 -0.1      
auxotrophy YNB Glucose 75mM Methionine 0.4 0.1      
facs on lipid accumulation Sorted Low BODIPY Gate 0.7 -0.1      
auxotrophy YNB Glucose 0.4 0.3      
growth on oleic acid YNB Oleic Acid 0.5 0.2      
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